Protein–RNA interactions for Protein: P01798

Ig heavy chain V-III region E109, mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01798 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC19.3■□□□□ 0.68
P01798 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
P01798 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
P01798 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
P01798 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
P01798 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
P01798 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
P01798 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
P01798 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
P01798 Mir6538-201ENSMUST00000183713 110 ntBASIC19.28■□□□□ 0.68
P01798 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC19.28■□□□□ 0.68
P01798 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
P01798 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
P01798 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
P01798 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC19.27■□□□□ 0.68
P01798 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
P01798 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
P01798 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
P01798 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
P01798 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
P01798 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
P01798 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
P01798 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
P01798 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
P01798 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
P01798 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
P01798 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC19.24■□□□□ 0.67
P01798 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
P01798 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
P01798 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
P01798 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
P01798 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
P01798 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
P01798 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
P01798 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
P01798 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.21■□□□□ 0.67
P01798 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
P01798 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
P01798 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
P01798 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
P01798 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
P01798 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
P01798 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
P01798 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
P01798 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
P01798 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
P01798 AC167019.3-201ENSMUST00000228225 1266 ntBASIC19.19■□□□□ 0.66
P01798 Gm6311-201ENSMUST00000073790 878 ntBASIC19.19■□□□□ 0.66
P01798 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
P01798 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
P01798 Gm14121-201ENSMUST00000121441 1380 ntBASIC19.18■□□□□ 0.66
P01798 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.17■□□□□ 0.66
P01798 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
P01798 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
P01798 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
P01798 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
P01798 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
P01798 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
P01798 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
P01798 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
P01798 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
P01798 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
P01798 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
P01798 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
P01798 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
P01798 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
P01798 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
P01798 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
P01798 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
P01798 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
P01798 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
P01798 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
P01798 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
P01798 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
P01798 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
P01798 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
P01798 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.13■□□□□ 0.65
P01798 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
P01798 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
P01798 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
P01798 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
P01798 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
P01798 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
P01798 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
P01798 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
P01798 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
P01798 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
P01798 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
P01798 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC19.11■□□□□ 0.65
P01798 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC19.11■□□□□ 0.65
P01798 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
P01798 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
P01798 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
P01798 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
P01798 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
P01798 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
P01798 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC19.1■□□□□ 0.65
P01798 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
P01798 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
P01798 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms