Protein–RNA interactions for Protein: O88174

Cd46, Membrane cofactor protein, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd46O88174 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.66■□□□□ 0.9
Cd46O88174 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.66■□□□□ 0.9
Cd46O88174 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cd46O88174 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.66■□□□□ 0.9
Cd46O88174 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cd46O88174 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Cd46O88174 Gm15546-201ENSMUST00000122095 826 ntBASIC20.65■□□□□ 0.9
Cd46O88174 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Cd46O88174 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cd46O88174 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cd46O88174 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cd46O88174 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Cd46O88174 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.64■□□□□ 0.9
Cd46O88174 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC20.64■□□□□ 0.89
Cd46O88174 Gm44428-201ENSMUST00000204474 874 ntBASIC20.64■□□□□ 0.89
Cd46O88174 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Cd46O88174 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cd46O88174 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cd46O88174 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cd46O88174 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cd46O88174 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Cd46O88174 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.63■□□□□ 0.89
Cd46O88174 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Cd46O88174 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.62■□□□□ 0.89
Cd46O88174 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cd46O88174 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cd46O88174 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cd46O88174 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Cd46O88174 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Cd46O88174 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Cd46O88174 Gm15039-201ENSMUST00000118914 875 ntBASIC20.6■□□□□ 0.89
Cd46O88174 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cd46O88174 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cd46O88174 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cd46O88174 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.59■□□□□ 0.89
Cd46O88174 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Cd46O88174 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cd46O88174 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Cd46O88174 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cd46O88174 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Cd46O88174 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Cd46O88174 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.57■□□□□ 0.88
Cd46O88174 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cd46O88174 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Cd46O88174 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cd46O88174 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cd46O88174 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cd46O88174 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cd46O88174 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cd46O88174 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cd46O88174 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cd46O88174 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Cd46O88174 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
Cd46O88174 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cd46O88174 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cd46O88174 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC20.55■□□□□ 0.88
Cd46O88174 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cd46O88174 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cd46O88174 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
Cd46O88174 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cd46O88174 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
Cd46O88174 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.52■□□□□ 0.88
Cd46O88174 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Cd46O88174 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Cd46O88174 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.51■□□□□ 0.87
Cd46O88174 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Cd46O88174 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cd46O88174 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cd46O88174 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.5■□□□□ 0.87
Cd46O88174 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cd46O88174 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cd46O88174 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cd46O88174 Gm43566-201ENSMUST00000196851 808 ntBASIC20.49■□□□□ 0.87
Cd46O88174 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.49■□□□□ 0.87
Cd46O88174 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.49■□□□□ 0.87
Cd46O88174 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.49■□□□□ 0.87
Cd46O88174 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Cd46O88174 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Cd46O88174 Gm6206-201ENSMUST00000133472 2199 ntBASIC20.48■□□□□ 0.87
Cd46O88174 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
Cd46O88174 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cd46O88174 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.48■□□□□ 0.87
Cd46O88174 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Cd46O88174 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cd46O88174 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cd46O88174 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.47■□□□□ 0.87
Cd46O88174 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Cd46O88174 Gm13238-201ENSMUST00000117655 780 ntBASIC20.47■□□□□ 0.87
Cd46O88174 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Cd46O88174 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Cd46O88174 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cd46O88174 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cd46O88174 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Cd46O88174 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Cd46O88174 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cd46O88174 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cd46O88174 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Cd46O88174 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cd46O88174 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Cd46O88174 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms