Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Shisa8J3QNX5 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.73■□□□□ 0.91
Shisa8J3QNX5 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Shisa8J3QNX5 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Shisa8J3QNX5 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Shisa8J3QNX5 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Shisa8J3QNX5 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Shisa8J3QNX5 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Shisa8J3QNX5 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
Shisa8J3QNX5 Gm24970-201ENSMUST00000175582 82 ntBASIC20.72■□□□□ 0.91
Shisa8J3QNX5 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Shisa8J3QNX5 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Shisa8J3QNX5 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.72■□□□□ 0.91
Shisa8J3QNX5 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Shisa8J3QNX5 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Shisa8J3QNX5 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Shisa8J3QNX5 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Shisa8J3QNX5 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Shisa8J3QNX5 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.91
Shisa8J3QNX5 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Shisa8J3QNX5 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Shisa8J3QNX5 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Shisa8J3QNX5 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Shisa8J3QNX5 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Shisa8J3QNX5 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.7■□□□□ 0.9
Shisa8J3QNX5 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Shisa8J3QNX5 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Shisa8J3QNX5 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.69■□□□□ 0.9
Shisa8J3QNX5 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Shisa8J3QNX5 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Shisa8J3QNX5 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Shisa8J3QNX5 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Shisa8J3QNX5 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Shisa8J3QNX5 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Shisa8J3QNX5 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Shisa8J3QNX5 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Shisa8J3QNX5 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Shisa8J3QNX5 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Shisa8J3QNX5 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.67■□□□□ 0.9
Shisa8J3QNX5 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Shisa8J3QNX5 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Shisa8J3QNX5 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Shisa8J3QNX5 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Shisa8J3QNX5 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
Shisa8J3QNX5 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Shisa8J3QNX5 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.65■□□□□ 0.9
Shisa8J3QNX5 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.64■□□□□ 0.9
Shisa8J3QNX5 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Shisa8J3QNX5 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Shisa8J3QNX5 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Shisa8J3QNX5 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Shisa8J3QNX5 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Shisa8J3QNX5 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Shisa8J3QNX5 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Shisa8J3QNX5 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Shisa8J3QNX5 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Shisa8J3QNX5 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Shisa8J3QNX5 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.62■□□□□ 0.89
Shisa8J3QNX5 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Shisa8J3QNX5 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Shisa8J3QNX5 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Shisa8J3QNX5 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Shisa8J3QNX5 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC20.61■□□□□ 0.89
Shisa8J3QNX5 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Shisa8J3QNX5 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Shisa8J3QNX5 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Shisa8J3QNX5 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Shisa8J3QNX5 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Shisa8J3QNX5 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Shisa8J3QNX5 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Shisa8J3QNX5 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Shisa8J3QNX5 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.59■□□□□ 0.89
Shisa8J3QNX5 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Shisa8J3QNX5 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Shisa8J3QNX5 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Shisa8J3QNX5 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Shisa8J3QNX5 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Shisa8J3QNX5 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Shisa8J3QNX5 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Shisa8J3QNX5 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Shisa8J3QNX5 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Shisa8J3QNX5 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Shisa8J3QNX5 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Shisa8J3QNX5 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Shisa8J3QNX5 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Shisa8J3QNX5 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Shisa8J3QNX5 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Shisa8J3QNX5 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Shisa8J3QNX5 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Shisa8J3QNX5 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Shisa8J3QNX5 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Shisa8J3QNX5 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Shisa8J3QNX5 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.54■□□□□ 0.88
Shisa8J3QNX5 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Shisa8J3QNX5 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Shisa8J3QNX5 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.53■□□□□ 0.88
Shisa8J3QNX5 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Shisa8J3QNX5 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.52■□□□□ 0.88
Shisa8J3QNX5 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Shisa8J3QNX5 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 994.2 ms