Protein–RNA interactions for Protein: J3QMK1

Sgo2b, Shugoshin 2B, mousemouse

Predictions only

Length 1,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sgo2bJ3QMK1 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
Sgo2bJ3QMK1 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Sgo2bJ3QMK1 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC22.62■■□□□ 1.21
Sgo2bJ3QMK1 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Sgo2bJ3QMK1 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Sgo2bJ3QMK1 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Sgo2bJ3QMK1 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Sgo2bJ3QMK1 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC22.61■■□□□ 1.21
Sgo2bJ3QMK1 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Sgo2bJ3QMK1 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Sgo2bJ3QMK1 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Sgo2bJ3QMK1 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Sgo2bJ3QMK1 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
Sgo2bJ3QMK1 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Sgo2bJ3QMK1 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Sgo2bJ3QMK1 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
Sgo2bJ3QMK1 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
Sgo2bJ3QMK1 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Sgo2bJ3QMK1 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Sgo2bJ3QMK1 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC22.58■■□□□ 1.21
Sgo2bJ3QMK1 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Sgo2bJ3QMK1 Gm7432-201ENSMUST00000210343 879 ntBASIC22.58■■□□□ 1.21
Sgo2bJ3QMK1 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
Sgo2bJ3QMK1 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Sgo2bJ3QMK1 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Sgo2bJ3QMK1 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC22.57■■□□□ 1.2
Sgo2bJ3QMK1 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Sgo2bJ3QMK1 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Sgo2bJ3QMK1 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Sgo2bJ3QMK1 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Sgo2bJ3QMK1 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC22.56■■□□□ 1.2
Sgo2bJ3QMK1 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Sgo2bJ3QMK1 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Sgo2bJ3QMK1 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Sgo2bJ3QMK1 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Sgo2bJ3QMK1 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Sgo2bJ3QMK1 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Sgo2bJ3QMK1 Gm13889-201ENSMUST00000099689 1386 ntBASIC22.54■■□□□ 1.2
Sgo2bJ3QMK1 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Sgo2bJ3QMK1 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Sgo2bJ3QMK1 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
Sgo2bJ3QMK1 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Sgo2bJ3QMK1 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Sgo2bJ3QMK1 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Sgo2bJ3QMK1 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC22.52■■□□□ 1.2
Sgo2bJ3QMK1 Gm4799-201ENSMUST00000095396 657 ntBASIC22.52■■□□□ 1.2
Sgo2bJ3QMK1 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Sgo2bJ3QMK1 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Sgo2bJ3QMK1 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Sgo2bJ3QMK1 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC22.51■■□□□ 1.19
Sgo2bJ3QMK1 Gm11599-201ENSMUST00000118720 878 ntBASIC22.51■■□□□ 1.19
Sgo2bJ3QMK1 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Sgo2bJ3QMK1 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC22.51■■□□□ 1.19
Sgo2bJ3QMK1 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC22.51■■□□□ 1.19
Sgo2bJ3QMK1 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Sgo2bJ3QMK1 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Sgo2bJ3QMK1 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Sgo2bJ3QMK1 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
Sgo2bJ3QMK1 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Sgo2bJ3QMK1 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Sgo2bJ3QMK1 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC22.5■■□□□ 1.19
Sgo2bJ3QMK1 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Sgo2bJ3QMK1 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Sgo2bJ3QMK1 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Sgo2bJ3QMK1 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Sgo2bJ3QMK1 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Sgo2bJ3QMK1 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC22.49■■□□□ 1.19
Sgo2bJ3QMK1 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
Sgo2bJ3QMK1 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Sgo2bJ3QMK1 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Sgo2bJ3QMK1 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Sgo2bJ3QMK1 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC22.48■■□□□ 1.19
Sgo2bJ3QMK1 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Sgo2bJ3QMK1 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC22.46■■□□□ 1.19
Sgo2bJ3QMK1 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Sgo2bJ3QMK1 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
Sgo2bJ3QMK1 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Sgo2bJ3QMK1 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC22.45■■□□□ 1.18
Sgo2bJ3QMK1 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
Sgo2bJ3QMK1 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Sgo2bJ3QMK1 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Sgo2bJ3QMK1 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
Sgo2bJ3QMK1 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Sgo2bJ3QMK1 Gm5987-201ENSMUST00000196433 1151 ntBASIC22.44■■□□□ 1.18
Sgo2bJ3QMK1 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
Sgo2bJ3QMK1 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
Sgo2bJ3QMK1 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
Sgo2bJ3QMK1 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
Sgo2bJ3QMK1 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
Sgo2bJ3QMK1 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Sgo2bJ3QMK1 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Sgo2bJ3QMK1 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC22.42■■□□□ 1.18
Sgo2bJ3QMK1 Mir3960-201ENSMUST00000198213 73 ntBASIC22.42■■□□□ 1.18
Sgo2bJ3QMK1 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
Sgo2bJ3QMK1 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Sgo2bJ3QMK1 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Sgo2bJ3QMK1 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Sgo2bJ3QMK1 Gm9812-201ENSMUST00000061934 968 ntBASIC22.41■■□□□ 1.18
Sgo2bJ3QMK1 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
Sgo2bJ3QMK1 AC154454.1-201ENSMUST00000225253 216 ntBASIC22.4■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms