Protein–RNA interactions for Protein: J3KMR8

Gm17535, Predicted gene, 17535, mousemouse

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm17535J3KMR8 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
Gm17535J3KMR8 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Gm17535J3KMR8 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Gm17535J3KMR8 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Gm17535J3KMR8 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC24.51■■□□□ 1.51
Gm17535J3KMR8 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
Gm17535J3KMR8 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC24.51■■□□□ 1.51
Gm17535J3KMR8 Gm12366-201ENSMUST00000121722 873 ntBASIC24.51■■□□□ 1.51
Gm17535J3KMR8 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC24.51■■□□□ 1.51
Gm17535J3KMR8 Gm27502-201ENSMUST00000183495 199 ntBASIC24.51■■□□□ 1.51
Gm17535J3KMR8 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC24.51■■□□□ 1.51
Gm17535J3KMR8 Gm5786-201ENSMUST00000085368 882 ntBASIC24.51■■□□□ 1.51
Gm17535J3KMR8 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC24.51■■□□□ 1.51
Gm17535J3KMR8 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Gm17535J3KMR8 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Gm17535J3KMR8 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
Gm17535J3KMR8 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Gm17535J3KMR8 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC24.5■■□□□ 1.51
Gm17535J3KMR8 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Gm17535J3KMR8 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC24.5■■□□□ 1.51
Gm17535J3KMR8 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Gm17535J3KMR8 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC24.5■■□□□ 1.51
Gm17535J3KMR8 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Gm17535J3KMR8 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Gm17535J3KMR8 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Gm17535J3KMR8 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
Gm17535J3KMR8 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Gm17535J3KMR8 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Gm17535J3KMR8 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC24.48■■□□□ 1.51
Gm17535J3KMR8 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Gm17535J3KMR8 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Gm17535J3KMR8 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC24.48■■□□□ 1.51
Gm17535J3KMR8 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
Gm17535J3KMR8 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Gm17535J3KMR8 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
Gm17535J3KMR8 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Gm17535J3KMR8 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC24.46■■□□□ 1.51
Gm17535J3KMR8 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC24.46■■□□□ 1.51
Gm17535J3KMR8 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Gm17535J3KMR8 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC24.46■■□□□ 1.51
Gm17535J3KMR8 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC24.46■■□□□ 1.51
Gm17535J3KMR8 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Gm17535J3KMR8 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Gm17535J3KMR8 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Gm17535J3KMR8 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Gm17535J3KMR8 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Gm17535J3KMR8 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Gm17535J3KMR8 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
Gm17535J3KMR8 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Gm17535J3KMR8 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Gm17535J3KMR8 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC24.44■■□□□ 1.5
Gm17535J3KMR8 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
Gm17535J3KMR8 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC24.43■■□□□ 1.5
Gm17535J3KMR8 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Gm17535J3KMR8 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Gm17535J3KMR8 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
Gm17535J3KMR8 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC24.42■■□□□ 1.5
Gm17535J3KMR8 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Gm17535J3KMR8 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
Gm17535J3KMR8 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Gm17535J3KMR8 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Gm17535J3KMR8 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Gm17535J3KMR8 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Gm17535J3KMR8 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Gm17535J3KMR8 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Gm17535J3KMR8 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Gm17535J3KMR8 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Gm17535J3KMR8 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC24.4■■□□□ 1.5
Gm17535J3KMR8 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Gm17535J3KMR8 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.49
Gm17535J3KMR8 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC24.39■■□□□ 1.49
Gm17535J3KMR8 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Gm17535J3KMR8 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
Gm17535J3KMR8 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
Gm17535J3KMR8 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC24.38■■□□□ 1.49
Gm17535J3KMR8 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC24.38■■□□□ 1.49
Gm17535J3KMR8 Gm14523-201ENSMUST00000117260 558 ntBASIC24.38■■□□□ 1.49
Gm17535J3KMR8 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
Gm17535J3KMR8 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Gm17535J3KMR8 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Gm17535J3KMR8 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Gm17535J3KMR8 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Gm17535J3KMR8 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC24.36■■□□□ 1.49
Gm17535J3KMR8 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Gm17535J3KMR8 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
Gm17535J3KMR8 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Gm17535J3KMR8 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC24.35■■□□□ 1.49
Gm17535J3KMR8 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Gm17535J3KMR8 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC24.35■■□□□ 1.49
Gm17535J3KMR8 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Gm17535J3KMR8 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC24.34■■□□□ 1.49
Gm17535J3KMR8 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Gm17535J3KMR8 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Gm17535J3KMR8 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Gm17535J3KMR8 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.49
Gm17535J3KMR8 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
Gm17535J3KMR8 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC24.33■■□□□ 1.49
Gm17535J3KMR8 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Gm17535J3KMR8 Gm7332-201ENSMUST00000118351 454 ntBASIC24.32■■□□□ 1.48
Gm17535J3KMR8 AC153890.1-201ENSMUST00000220021 2469 ntBASIC24.32■■□□□ 1.48
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms