Protein–RNA interactions for Protein: D3Z6R0

Gm5478, Predicted pseudogene 5478, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5478D3Z6R0 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gm5478D3Z6R0 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gm5478D3Z6R0 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Gm5478D3Z6R0 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Gm5478D3Z6R0 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gm5478D3Z6R0 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Gm5478D3Z6R0 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gm5478D3Z6R0 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Gm5478D3Z6R0 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gm5478D3Z6R0 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gm5478D3Z6R0 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gm5478D3Z6R0 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gm5478D3Z6R0 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Gm5478D3Z6R0 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Gm5478D3Z6R0 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Gm5478D3Z6R0 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Gm5478D3Z6R0 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Gm5478D3Z6R0 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gm5478D3Z6R0 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gm5478D3Z6R0 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC20.25■□□□□ 0.83
Gm5478D3Z6R0 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Gm5478D3Z6R0 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gm5478D3Z6R0 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gm5478D3Z6R0 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gm5478D3Z6R0 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gm5478D3Z6R0 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Gm5478D3Z6R0 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gm5478D3Z6R0 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gm5478D3Z6R0 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gm5478D3Z6R0 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gm5478D3Z6R0 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gm5478D3Z6R0 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.22■□□□□ 0.83
Gm5478D3Z6R0 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gm5478D3Z6R0 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Gm5478D3Z6R0 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gm5478D3Z6R0 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gm5478D3Z6R0 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gm5478D3Z6R0 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.2■□□□□ 0.82
Gm5478D3Z6R0 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm5478D3Z6R0 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Gm5478D3Z6R0 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.2■□□□□ 0.82
Gm5478D3Z6R0 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm5478D3Z6R0 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gm5478D3Z6R0 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gm5478D3Z6R0 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Gm5478D3Z6R0 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Gm5478D3Z6R0 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gm5478D3Z6R0 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Gm5478D3Z6R0 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Gm5478D3Z6R0 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Gm5478D3Z6R0 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Gm5478D3Z6R0 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Gm5478D3Z6R0 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Gm5478D3Z6R0 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gm5478D3Z6R0 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Gm5478D3Z6R0 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.17■□□□□ 0.82
Gm5478D3Z6R0 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.17■□□□□ 0.82
Gm5478D3Z6R0 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Gm5478D3Z6R0 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gm5478D3Z6R0 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gm5478D3Z6R0 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.15■□□□□ 0.82
Gm5478D3Z6R0 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Gm5478D3Z6R0 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gm5478D3Z6R0 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gm5478D3Z6R0 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gm5478D3Z6R0 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Gm5478D3Z6R0 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Gm5478D3Z6R0 Notumos-201ENSMUST00000151998 2659 ntBASIC20.14■□□□□ 0.82
Gm5478D3Z6R0 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Gm5478D3Z6R0 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Gm5478D3Z6R0 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.14■□□□□ 0.82
Gm5478D3Z6R0 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Gm5478D3Z6R0 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Gm5478D3Z6R0 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.14■□□□□ 0.81
Gm5478D3Z6R0 AC166822.3-201ENSMUST00000227394 661 ntBASIC20.14■□□□□ 0.81
Gm5478D3Z6R0 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Gm5478D3Z6R0 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Gm5478D3Z6R0 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Gm5478D3Z6R0 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Gm5478D3Z6R0 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Gm5478D3Z6R0 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Gm5478D3Z6R0 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Gm5478D3Z6R0 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Gm5478D3Z6R0 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Gm5478D3Z6R0 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Gm5478D3Z6R0 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Gm5478D3Z6R0 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Gm5478D3Z6R0 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Gm5478D3Z6R0 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC20.12■□□□□ 0.81
Gm5478D3Z6R0 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gm5478D3Z6R0 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gm5478D3Z6R0 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Gm5478D3Z6R0 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gm5478D3Z6R0 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Gm5478D3Z6R0 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
Gm5478D3Z6R0 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gm5478D3Z6R0 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gm5478D3Z6R0 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gm5478D3Z6R0 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Gm5478D3Z6R0 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms