Protein–RNA interactions for Protein: A0A504

Smim17, MCG116182, isoform CRA_b, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim17A0A504 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Smim17A0A504 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smim17A0A504 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smim17A0A504 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.64■□□□□ 0.9
Smim17A0A504 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Smim17A0A504 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Smim17A0A504 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Smim17A0A504 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC20.63■□□□□ 0.89
Smim17A0A504 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smim17A0A504 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Smim17A0A504 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smim17A0A504 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Smim17A0A504 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.63■□□□□ 0.89
Smim17A0A504 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Smim17A0A504 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Smim17A0A504 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Smim17A0A504 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.61■□□□□ 0.89
Smim17A0A504 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smim17A0A504 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Smim17A0A504 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Smim17A0A504 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smim17A0A504 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smim17A0A504 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Smim17A0A504 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smim17A0A504 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.6■□□□□ 0.89
Smim17A0A504 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Smim17A0A504 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smim17A0A504 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smim17A0A504 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.59■□□□□ 0.89
Smim17A0A504 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.58■□□□□ 0.89
Smim17A0A504 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Smim17A0A504 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC20.58■□□□□ 0.88
Smim17A0A504 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Smim17A0A504 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Smim17A0A504 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.57■□□□□ 0.88
Smim17A0A504 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smim17A0A504 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Smim17A0A504 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Smim17A0A504 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Smim17A0A504 Peli2-204ENSMUST00000226513 1320 ntBASIC20.56■□□□□ 0.88
Smim17A0A504 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Smim17A0A504 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Smim17A0A504 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Smim17A0A504 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Smim17A0A504 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.55■□□□□ 0.88
Smim17A0A504 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Smim17A0A504 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Smim17A0A504 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Smim17A0A504 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Smim17A0A504 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Smim17A0A504 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Smim17A0A504 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Smim17A0A504 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Smim17A0A504 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Smim17A0A504 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Smim17A0A504 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Smim17A0A504 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smim17A0A504 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smim17A0A504 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smim17A0A504 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smim17A0A504 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smim17A0A504 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Smim17A0A504 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Smim17A0A504 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Smim17A0A504 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Smim17A0A504 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Smim17A0A504 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Smim17A0A504 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Smim17A0A504 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Smim17A0A504 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Smim17A0A504 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Smim17A0A504 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Smim17A0A504 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.51■□□□□ 0.87
Smim17A0A504 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Smim17A0A504 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Smim17A0A504 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Smim17A0A504 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Smim17A0A504 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Smim17A0A504 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Smim17A0A504 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Smim17A0A504 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Smim17A0A504 Gm26115-201ENSMUST00000175605 87 ntBASIC20.49■□□□□ 0.87
Smim17A0A504 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Smim17A0A504 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Smim17A0A504 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Smim17A0A504 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Smim17A0A504 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Smim17A0A504 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.47■□□□□ 0.87
Smim17A0A504 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smim17A0A504 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smim17A0A504 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Smim17A0A504 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smim17A0A504 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.47■□□□□ 0.87
Smim17A0A504 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Smim17A0A504 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Smim17A0A504 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smim17A0A504 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Smim17A0A504 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smim17A0A504 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Smim17A0A504 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms