Protein–RNA interactions for Protein: A0A0U1RP99

Ino80e, INO80 complex subunit E (Fragment), mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ino80eA0A0U1RP99 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ino80eA0A0U1RP99 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Ino80eA0A0U1RP99 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
Ino80eA0A0U1RP99 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Ino80eA0A0U1RP99 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ino80eA0A0U1RP99 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ino80eA0A0U1RP99 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ino80eA0A0U1RP99 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ino80eA0A0U1RP99 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ino80eA0A0U1RP99 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ino80eA0A0U1RP99 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ino80eA0A0U1RP99 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ino80eA0A0U1RP99 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ino80eA0A0U1RP99 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ino80eA0A0U1RP99 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Ino80eA0A0U1RP99 Gm6934-201ENSMUST00000194780 1905 ntBASIC18.92■□□□□ 0.62
Ino80eA0A0U1RP99 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Ino80eA0A0U1RP99 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC18.92■□□□□ 0.62
Ino80eA0A0U1RP99 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Ino80eA0A0U1RP99 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ino80eA0A0U1RP99 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
Ino80eA0A0U1RP99 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC18.91■□□□□ 0.62
Ino80eA0A0U1RP99 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ino80eA0A0U1RP99 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ino80eA0A0U1RP99 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Ino80eA0A0U1RP99 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ino80eA0A0U1RP99 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ino80eA0A0U1RP99 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
Ino80eA0A0U1RP99 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ino80eA0A0U1RP99 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ino80eA0A0U1RP99 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC18.89■□□□□ 0.61
Ino80eA0A0U1RP99 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ino80eA0A0U1RP99 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ino80eA0A0U1RP99 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ino80eA0A0U1RP99 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ino80eA0A0U1RP99 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ino80eA0A0U1RP99 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ino80eA0A0U1RP99 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ino80eA0A0U1RP99 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ino80eA0A0U1RP99 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ino80eA0A0U1RP99 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ino80eA0A0U1RP99 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Ino80eA0A0U1RP99 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ino80eA0A0U1RP99 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ino80eA0A0U1RP99 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ino80eA0A0U1RP99 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ino80eA0A0U1RP99 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.86■□□□□ 0.61
Ino80eA0A0U1RP99 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Ino80eA0A0U1RP99 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ino80eA0A0U1RP99 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ino80eA0A0U1RP99 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ino80eA0A0U1RP99 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Ino80eA0A0U1RP99 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ino80eA0A0U1RP99 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC18.84■□□□□ 0.61
Ino80eA0A0U1RP99 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ino80eA0A0U1RP99 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ino80eA0A0U1RP99 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ino80eA0A0U1RP99 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC18.83■□□□□ 0.61
Ino80eA0A0U1RP99 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Ino80eA0A0U1RP99 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ino80eA0A0U1RP99 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Ino80eA0A0U1RP99 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ino80eA0A0U1RP99 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC18.83■□□□□ 0.6
Ino80eA0A0U1RP99 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ino80eA0A0U1RP99 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC18.82■□□□□ 0.6
Ino80eA0A0U1RP99 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.82■□□□□ 0.6
Ino80eA0A0U1RP99 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ino80eA0A0U1RP99 Pcf11-205ENSMUST00000208255 1720 ntBASIC18.82■□□□□ 0.6
Ino80eA0A0U1RP99 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ino80eA0A0U1RP99 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ino80eA0A0U1RP99 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ino80eA0A0U1RP99 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ino80eA0A0U1RP99 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ino80eA0A0U1RP99 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ino80eA0A0U1RP99 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ino80eA0A0U1RP99 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ino80eA0A0U1RP99 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ino80eA0A0U1RP99 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ino80eA0A0U1RP99 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ino80eA0A0U1RP99 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Ino80eA0A0U1RP99 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Ino80eA0A0U1RP99 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ino80eA0A0U1RP99 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ino80eA0A0U1RP99 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ino80eA0A0U1RP99 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ino80eA0A0U1RP99 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ino80eA0A0U1RP99 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ino80eA0A0U1RP99 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ino80eA0A0U1RP99 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ino80eA0A0U1RP99 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Ino80eA0A0U1RP99 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Ino80eA0A0U1RP99 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ino80eA0A0U1RP99 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ino80eA0A0U1RP99 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ino80eA0A0U1RP99 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC18.76■□□□□ 0.59
Ino80eA0A0U1RP99 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Ino80eA0A0U1RP99 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ino80eA0A0U1RP99 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ino80eA0A0U1RP99 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ino80eA0A0U1RP99 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms