Protein–RNA interactions for Protein: A0A0G2JG17

Trav23, T cell receptor alpha variable 23 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav23A0A0G2JG17 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav23A0A0G2JG17 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav23A0A0G2JG17 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav23A0A0G2JG17 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC18.42■□□□□ 0.54
Trav23A0A0G2JG17 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Trav23A0A0G2JG17 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Trav23A0A0G2JG17 Mir3960-201ENSMUST00000198213 73 ntBASIC18.42■□□□□ 0.54
Trav23A0A0G2JG17 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav23A0A0G2JG17 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC18.41■□□□□ 0.54
Trav23A0A0G2JG17 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav23A0A0G2JG17 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Trav23A0A0G2JG17 Gm14121-201ENSMUST00000121441 1380 ntBASIC18.4■□□□□ 0.54
Trav23A0A0G2JG17 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav23A0A0G2JG17 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC18.39■□□□□ 0.53
Trav23A0A0G2JG17 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC18.39■□□□□ 0.53
Trav23A0A0G2JG17 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trav23A0A0G2JG17 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
Trav23A0A0G2JG17 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trav23A0A0G2JG17 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav23A0A0G2JG17 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trav23A0A0G2JG17 AC154454.1-201ENSMUST00000225253 216 ntBASIC18.38■□□□□ 0.53
Trav23A0A0G2JG17 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Trav23A0A0G2JG17 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC18.38■□□□□ 0.53
Trav23A0A0G2JG17 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav23A0A0G2JG17 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trav23A0A0G2JG17 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav23A0A0G2JG17 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav23A0A0G2JG17 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav23A0A0G2JG17 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav23A0A0G2JG17 Gm45364-201ENSMUST00000210883 159 ntBASIC18.36■□□□□ 0.53
Trav23A0A0G2JG17 Pkd1-207ENSMUST00000228550 1050 ntBASIC18.36■□□□□ 0.53
Trav23A0A0G2JG17 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav23A0A0G2JG17 Gm13889-201ENSMUST00000099689 1386 ntBASIC18.36■□□□□ 0.53
Trav23A0A0G2JG17 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
Trav23A0A0G2JG17 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav23A0A0G2JG17 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Trav23A0A0G2JG17 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav23A0A0G2JG17 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC18.34■□□□□ 0.53
Trav23A0A0G2JG17 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trav23A0A0G2JG17 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav23A0A0G2JG17 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trav23A0A0G2JG17 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Trav23A0A0G2JG17 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Trav23A0A0G2JG17 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC18.33■□□□□ 0.52
Trav23A0A0G2JG17 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trav23A0A0G2JG17 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Trav23A0A0G2JG17 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trav23A0A0G2JG17 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trav23A0A0G2JG17 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
Trav23A0A0G2JG17 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav23A0A0G2JG17 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav23A0A0G2JG17 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav23A0A0G2JG17 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Trav23A0A0G2JG17 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Trav23A0A0G2JG17 Gm17641-201ENSMUST00000166328 2350 ntBASIC18.32■□□□□ 0.52
Trav23A0A0G2JG17 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav23A0A0G2JG17 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav23A0A0G2JG17 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav23A0A0G2JG17 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC18.31■□□□□ 0.52
Trav23A0A0G2JG17 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC18.31■□□□□ 0.52
Trav23A0A0G2JG17 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Trav23A0A0G2JG17 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav23A0A0G2JG17 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav23A0A0G2JG17 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trav23A0A0G2JG17 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Trav23A0A0G2JG17 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trav23A0A0G2JG17 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav23A0A0G2JG17 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav23A0A0G2JG17 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav23A0A0G2JG17 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Trav23A0A0G2JG17 Gm11175-201ENSMUST00000116172 543 ntBASIC18.29■□□□□ 0.52
Trav23A0A0G2JG17 Scarna2-201ENSMUST00000157560 414 ntBASIC18.29■□□□□ 0.52
Trav23A0A0G2JG17 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav23A0A0G2JG17 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav23A0A0G2JG17 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav23A0A0G2JG17 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav23A0A0G2JG17 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav23A0A0G2JG17 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav23A0A0G2JG17 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav23A0A0G2JG17 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC18.28■□□□□ 0.52
Trav23A0A0G2JG17 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav23A0A0G2JG17 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trav23A0A0G2JG17 Gm12818-201ENSMUST00000117562 1349 ntBASIC18.27■□□□□ 0.52
Trav23A0A0G2JG17 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Trav23A0A0G2JG17 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Trav23A0A0G2JG17 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Trav23A0A0G2JG17 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Trav23A0A0G2JG17 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trav23A0A0G2JG17 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trav23A0A0G2JG17 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trav23A0A0G2JG17 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trav23A0A0G2JG17 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav23A0A0G2JG17 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav23A0A0G2JG17 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav23A0A0G2JG17 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav23A0A0G2JG17 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trav23A0A0G2JG17 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav23A0A0G2JG17 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Trav23A0A0G2JG17 Gm9806-201ENSMUST00000051080 552 ntBASIC18.25■□□□□ 0.51
Trav23A0A0G2JG17 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 10.6 ms