Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav13n-4A0A0G2JG01 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav13n-4A0A0G2JG01 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav13n-4A0A0G2JG01 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trav13n-4A0A0G2JG01 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav13n-4A0A0G2JG01 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav13n-4A0A0G2JG01 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Trav13n-4A0A0G2JG01 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trav13n-4A0A0G2JG01 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav13n-4A0A0G2JG01 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav13n-4A0A0G2JG01 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav13n-4A0A0G2JG01 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trav13n-4A0A0G2JG01 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Trav13n-4A0A0G2JG01 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav13n-4A0A0G2JG01 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC18.24■□□□□ 0.51
Trav13n-4A0A0G2JG01 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC18.24■□□□□ 0.51
Trav13n-4A0A0G2JG01 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav13n-4A0A0G2JG01 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trav13n-4A0A0G2JG01 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav13n-4A0A0G2JG01 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trav13n-4A0A0G2JG01 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Trav13n-4A0A0G2JG01 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav13n-4A0A0G2JG01 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav13n-4A0A0G2JG01 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC18.22■□□□□ 0.51
Trav13n-4A0A0G2JG01 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC18.22■□□□□ 0.51
Trav13n-4A0A0G2JG01 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Trav13n-4A0A0G2JG01 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trav13n-4A0A0G2JG01 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC18.21■□□□□ 0.51
Trav13n-4A0A0G2JG01 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC18.21■□□□□ 0.51
Trav13n-4A0A0G2JG01 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
Trav13n-4A0A0G2JG01 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav13n-4A0A0G2JG01 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trav13n-4A0A0G2JG01 Il17rd-202ENSMUST00000223942 2186 ntBASIC18.2■□□□□ 0.5
Trav13n-4A0A0G2JG01 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav13n-4A0A0G2JG01 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav13n-4A0A0G2JG01 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav13n-4A0A0G2JG01 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav13n-4A0A0G2JG01 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Trav13n-4A0A0G2JG01 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trav13n-4A0A0G2JG01 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trav13n-4A0A0G2JG01 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav13n-4A0A0G2JG01 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav13n-4A0A0G2JG01 Gm37847-201ENSMUST00000192163 1497 ntBASIC18.19■□□□□ 0.5
Trav13n-4A0A0G2JG01 Gm31748-201ENSMUST00000194938 1497 ntBASIC18.19■□□□□ 0.5
Trav13n-4A0A0G2JG01 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav13n-4A0A0G2JG01 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav13n-4A0A0G2JG01 H3f3aos-201ENSMUST00000097448 2905 ntBASIC18.18■□□□□ 0.5
Trav13n-4A0A0G2JG01 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav13n-4A0A0G2JG01 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav13n-4A0A0G2JG01 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav13n-4A0A0G2JG01 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav13n-4A0A0G2JG01 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trav13n-4A0A0G2JG01 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav13n-4A0A0G2JG01 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC18.16■□□□□ 0.5
Trav13n-4A0A0G2JG01 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav13n-4A0A0G2JG01 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav13n-4A0A0G2JG01 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trav13n-4A0A0G2JG01 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
Trav13n-4A0A0G2JG01 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav13n-4A0A0G2JG01 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav13n-4A0A0G2JG01 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Trav13n-4A0A0G2JG01 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav13n-4A0A0G2JG01 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav13n-4A0A0G2JG01 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav13n-4A0A0G2JG01 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav13n-4A0A0G2JG01 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav13n-4A0A0G2JG01 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav13n-4A0A0G2JG01 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav13n-4A0A0G2JG01 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC18.13■□□□□ 0.49
Trav13n-4A0A0G2JG01 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Trav13n-4A0A0G2JG01 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trav13n-4A0A0G2JG01 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav13n-4A0A0G2JG01 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trav13n-4A0A0G2JG01 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Trav13n-4A0A0G2JG01 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav13n-4A0A0G2JG01 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav13n-4A0A0G2JG01 Scarna2-201ENSMUST00000157560 414 ntBASIC18.12■□□□□ 0.49
Trav13n-4A0A0G2JG01 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav13n-4A0A0G2JG01 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav13n-4A0A0G2JG01 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav13n-4A0A0G2JG01 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trav13n-4A0A0G2JG01 Gm11687-201ENSMUST00000118911 886 ntBASIC18.11■□□□□ 0.49
Trav13n-4A0A0G2JG01 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Trav13n-4A0A0G2JG01 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav13n-4A0A0G2JG01 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav13n-4A0A0G2JG01 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC18.11■□□□□ 0.49
Trav13n-4A0A0G2JG01 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trav13n-4A0A0G2JG01 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC18.1■□□□□ 0.49
Trav13n-4A0A0G2JG01 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trav13n-4A0A0G2JG01 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav13n-4A0A0G2JG01 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trav13n-4A0A0G2JG01 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav13n-4A0A0G2JG01 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trav13n-4A0A0G2JG01 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav13n-4A0A0G2JG01 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav13n-4A0A0G2JG01 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav13n-4A0A0G2JG01 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav13n-4A0A0G2JG01 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Trav13n-4A0A0G2JG01 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trav13n-4A0A0G2JG01 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms