Protein–RNA interactions for Protein: A0A0G2JE47

Igkv8-28, Immunoglobulin kappa variable 8-28 (Fragment), mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-28A0A0G2JE47 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Igkv8-28A0A0G2JE47 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Igkv8-28A0A0G2JE47 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Igkv8-28A0A0G2JE47 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Igkv8-28A0A0G2JE47 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Igkv8-28A0A0G2JE47 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Igkv8-28A0A0G2JE47 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Igkv8-28A0A0G2JE47 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Igkv8-28A0A0G2JE47 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Igkv8-28A0A0G2JE47 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Igkv8-28A0A0G2JE47 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Igkv8-28A0A0G2JE47 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Igkv8-28A0A0G2JE47 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Igkv8-28A0A0G2JE47 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Igkv8-28A0A0G2JE47 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Igkv8-28A0A0G2JE47 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Igkv8-28A0A0G2JE47 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Igkv8-28A0A0G2JE47 Gm6277-202ENSMUST00000224036 2779 ntBASIC14.21□□□□□ -0.13
Igkv8-28A0A0G2JE47 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Igkv8-28A0A0G2JE47 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Igkv8-28A0A0G2JE47 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Igkv8-28A0A0G2JE47 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
Igkv8-28A0A0G2JE47 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Igkv8-28A0A0G2JE47 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Igkv8-28A0A0G2JE47 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC14.21□□□□□ -0.14
Igkv8-28A0A0G2JE47 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Igkv8-28A0A0G2JE47 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Igkv8-28A0A0G2JE47 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC14.2□□□□□ -0.14
Igkv8-28A0A0G2JE47 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Igkv8-28A0A0G2JE47 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Igkv8-28A0A0G2JE47 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Igkv8-28A0A0G2JE47 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Igkv8-28A0A0G2JE47 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Igkv8-28A0A0G2JE47 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Igkv8-28A0A0G2JE47 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Igkv8-28A0A0G2JE47 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Igkv8-28A0A0G2JE47 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Igkv8-28A0A0G2JE47 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Igkv8-28A0A0G2JE47 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Igkv8-28A0A0G2JE47 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Igkv8-28A0A0G2JE47 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Igkv8-28A0A0G2JE47 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Igkv8-28A0A0G2JE47 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC14.17□□□□□ -0.14
Igkv8-28A0A0G2JE47 Gm16148-201ENSMUST00000119653 893 ntBASIC14.17□□□□□ -0.14
Igkv8-28A0A0G2JE47 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Igkv8-28A0A0G2JE47 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Igkv8-28A0A0G2JE47 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Igkv8-28A0A0G2JE47 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Igkv8-28A0A0G2JE47 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Igkv8-28A0A0G2JE47 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Igkv8-28A0A0G2JE47 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Igkv8-28A0A0G2JE47 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Igkv8-28A0A0G2JE47 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Igkv8-28A0A0G2JE47 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Igkv8-28A0A0G2JE47 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC14.15□□□□□ -0.14
Igkv8-28A0A0G2JE47 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Igkv8-28A0A0G2JE47 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
Igkv8-28A0A0G2JE47 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Igkv8-28A0A0G2JE47 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC14.15□□□□□ -0.14
Igkv8-28A0A0G2JE47 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Igkv8-28A0A0G2JE47 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Igkv8-28A0A0G2JE47 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Igkv8-28A0A0G2JE47 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Igkv8-28A0A0G2JE47 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Igkv8-28A0A0G2JE47 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Igkv8-28A0A0G2JE47 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Igkv8-28A0A0G2JE47 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Igkv8-28A0A0G2JE47 Gm42699-201ENSMUST00000198104 1657 ntBASIC14.14□□□□□ -0.15
Igkv8-28A0A0G2JE47 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Igkv8-28A0A0G2JE47 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Igkv8-28A0A0G2JE47 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Igkv8-28A0A0G2JE47 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Igkv8-28A0A0G2JE47 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Igkv8-28A0A0G2JE47 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Igkv8-28A0A0G2JE47 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Igkv8-28A0A0G2JE47 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Igkv8-28A0A0G2JE47 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Igkv8-28A0A0G2JE47 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Igkv8-28A0A0G2JE47 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Igkv8-28A0A0G2JE47 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Igkv8-28A0A0G2JE47 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Igkv8-28A0A0G2JE47 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Igkv8-28A0A0G2JE47 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Igkv8-28A0A0G2JE47 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Igkv8-28A0A0G2JE47 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Igkv8-28A0A0G2JE47 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Igkv8-28A0A0G2JE47 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Igkv8-28A0A0G2JE47 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Igkv8-28A0A0G2JE47 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Igkv8-28A0A0G2JE47 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC14.11□□□□□ -0.15
Igkv8-28A0A0G2JE47 Gm13042-201ENSMUST00000119244 1955 ntBASIC14.11□□□□□ -0.15
Igkv8-28A0A0G2JE47 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Igkv8-28A0A0G2JE47 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Igkv8-28A0A0G2JE47 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Igkv8-28A0A0G2JE47 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Igkv8-28A0A0G2JE47 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Igkv8-28A0A0G2JE47 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Igkv8-28A0A0G2JE47 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Igkv8-28A0A0G2JE47 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Igkv8-28A0A0G2JE47 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms