Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trav9n-2A0A0G2JDP3 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav9n-2A0A0G2JDP3 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav9n-2A0A0G2JDP3 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC16.44■□□□□ 0.22
Trav9n-2A0A0G2JDP3 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC16.44■□□□□ 0.22
Trav9n-2A0A0G2JDP3 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav9n-2A0A0G2JDP3 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Trav9n-2A0A0G2JDP3 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trav9n-2A0A0G2JDP3 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Trav9n-2A0A0G2JDP3 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Trav9n-2A0A0G2JDP3 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav9n-2A0A0G2JDP3 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav9n-2A0A0G2JDP3 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav9n-2A0A0G2JDP3 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Trav9n-2A0A0G2JDP3 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trav9n-2A0A0G2JDP3 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav9n-2A0A0G2JDP3 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav9n-2A0A0G2JDP3 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav9n-2A0A0G2JDP3 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav9n-2A0A0G2JDP3 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav9n-2A0A0G2JDP3 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav9n-2A0A0G2JDP3 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav9n-2A0A0G2JDP3 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav9n-2A0A0G2JDP3 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav9n-2A0A0G2JDP3 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav9n-2A0A0G2JDP3 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav9n-2A0A0G2JDP3 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav9n-2A0A0G2JDP3 Gm7432-201ENSMUST00000210343 879 ntBASIC16.41■□□□□ 0.22
Trav9n-2A0A0G2JDP3 Gm4419-202ENSMUST00000226239 1431 ntBASIC16.41■□□□□ 0.22
Trav9n-2A0A0G2JDP3 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trav9n-2A0A0G2JDP3 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trav9n-2A0A0G2JDP3 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC16.4■□□□□ 0.22
Trav9n-2A0A0G2JDP3 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav9n-2A0A0G2JDP3 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trav9n-2A0A0G2JDP3 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav9n-2A0A0G2JDP3 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
Trav9n-2A0A0G2JDP3 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav9n-2A0A0G2JDP3 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Trav9n-2A0A0G2JDP3 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC16.39■□□□□ 0.21
Trav9n-2A0A0G2JDP3 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trav9n-2A0A0G2JDP3 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav9n-2A0A0G2JDP3 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trav9n-2A0A0G2JDP3 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trav9n-2A0A0G2JDP3 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trav9n-2A0A0G2JDP3 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trav9n-2A0A0G2JDP3 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav9n-2A0A0G2JDP3 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav9n-2A0A0G2JDP3 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav9n-2A0A0G2JDP3 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav9n-2A0A0G2JDP3 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC16.37■□□□□ 0.21
Trav9n-2A0A0G2JDP3 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Trav9n-2A0A0G2JDP3 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav9n-2A0A0G2JDP3 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav9n-2A0A0G2JDP3 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav9n-2A0A0G2JDP3 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC16.36■□□□□ 0.21
Trav9n-2A0A0G2JDP3 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Trav9n-2A0A0G2JDP3 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC16.36■□□□□ 0.21
Trav9n-2A0A0G2JDP3 Gm11599-201ENSMUST00000118720 878 ntBASIC16.36■□□□□ 0.21
Trav9n-2A0A0G2JDP3 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Trav9n-2A0A0G2JDP3 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav9n-2A0A0G2JDP3 Gm4799-201ENSMUST00000095396 657 ntBASIC16.36■□□□□ 0.21
Trav9n-2A0A0G2JDP3 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trav9n-2A0A0G2JDP3 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav9n-2A0A0G2JDP3 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav9n-2A0A0G2JDP3 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC16.35■□□□□ 0.21
Trav9n-2A0A0G2JDP3 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav9n-2A0A0G2JDP3 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav9n-2A0A0G2JDP3 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav9n-2A0A0G2JDP3 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav9n-2A0A0G2JDP3 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav9n-2A0A0G2JDP3 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trav9n-2A0A0G2JDP3 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav9n-2A0A0G2JDP3 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trav9n-2A0A0G2JDP3 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC16.33■□□□□ 0.2
Trav9n-2A0A0G2JDP3 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trav9n-2A0A0G2JDP3 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav9n-2A0A0G2JDP3 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav9n-2A0A0G2JDP3 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Trav9n-2A0A0G2JDP3 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav9n-2A0A0G2JDP3 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC16.32■□□□□ 0.2
Trav9n-2A0A0G2JDP3 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav9n-2A0A0G2JDP3 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav9n-2A0A0G2JDP3 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Trav9n-2A0A0G2JDP3 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC16.31■□□□□ 0.2
Trav9n-2A0A0G2JDP3 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav9n-2A0A0G2JDP3 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trav9n-2A0A0G2JDP3 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Trav9n-2A0A0G2JDP3 Il17rd-202ENSMUST00000223942 2186 ntBASIC16.3■□□□□ 0.2
Trav9n-2A0A0G2JDP3 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav9n-2A0A0G2JDP3 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Trav9n-2A0A0G2JDP3 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav9n-2A0A0G2JDP3 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trav9n-2A0A0G2JDP3 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav9n-2A0A0G2JDP3 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav9n-2A0A0G2JDP3 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav9n-2A0A0G2JDP3 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav9n-2A0A0G2JDP3 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trav9n-2A0A0G2JDP3 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav9n-2A0A0G2JDP3 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav9n-2A0A0G2JDP3 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms