Protein–RNA interactions for Protein: A0A075B649

Trav13-2, T cell receptor alpha variable 13-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-2A0A075B649 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav13-2A0A075B649 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav13-2A0A075B649 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav13-2A0A075B649 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav13-2A0A075B649 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC15.18■□□□□ 0.02
Trav13-2A0A075B649 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Trav13-2A0A075B649 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Trav13-2A0A075B649 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav13-2A0A075B649 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav13-2A0A075B649 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC15.17■□□□□ 0.02
Trav13-2A0A075B649 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC15.17■□□□□ 0.02
Trav13-2A0A075B649 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav13-2A0A075B649 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav13-2A0A075B649 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Trav13-2A0A075B649 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav13-2A0A075B649 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav13-2A0A075B649 Gm30023-201ENSMUST00000197970 889 ntBASIC15.16■□□□□ 0.02
Trav13-2A0A075B649 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav13-2A0A075B649 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav13-2A0A075B649 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav13-2A0A075B649 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav13-2A0A075B649 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav13-2A0A075B649 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Trav13-2A0A075B649 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav13-2A0A075B649 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav13-2A0A075B649 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav13-2A0A075B649 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav13-2A0A075B649 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav13-2A0A075B649 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC15.14■□□□□ 0.01
Trav13-2A0A075B649 Zfp131-205ENSMUST00000223812 663 ntBASIC15.14■□□□□ 0.01
Trav13-2A0A075B649 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Trav13-2A0A075B649 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav13-2A0A075B649 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav13-2A0A075B649 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav13-2A0A075B649 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav13-2A0A075B649 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Trav13-2A0A075B649 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav13-2A0A075B649 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav13-2A0A075B649 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
Trav13-2A0A075B649 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Trav13-2A0A075B649 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav13-2A0A075B649 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Trav13-2A0A075B649 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Trav13-2A0A075B649 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav13-2A0A075B649 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav13-2A0A075B649 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC15.12■□□□□ 0.01
Trav13-2A0A075B649 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav13-2A0A075B649 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav13-2A0A075B649 Particl-201ENSMUST00000205370 1560 ntBASIC15.11■□□□□ 0.01
Trav13-2A0A075B649 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Trav13-2A0A075B649 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav13-2A0A075B649 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trav13-2A0A075B649 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav13-2A0A075B649 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav13-2A0A075B649 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav13-2A0A075B649 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav13-2A0A075B649 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav13-2A0A075B649 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav13-2A0A075B649 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Trav13-2A0A075B649 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav13-2A0A075B649 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Trav13-2A0A075B649 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Trav13-2A0A075B649 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav13-2A0A075B649 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav13-2A0A075B649 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC15.09■□□□□ 0.01
Trav13-2A0A075B649 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Trav13-2A0A075B649 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav13-2A0A075B649 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC15.08■□□□□ 0.01
Trav13-2A0A075B649 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trav13-2A0A075B649 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0.01
Trav13-2A0A075B649 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav13-2A0A075B649 Gm9397-201ENSMUST00000200125 605 ntBASIC15.08■□□□□ 0
Trav13-2A0A075B649 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0
Trav13-2A0A075B649 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav13-2A0A075B649 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Trav13-2A0A075B649 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav13-2A0A075B649 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav13-2A0A075B649 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav13-2A0A075B649 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav13-2A0A075B649 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC15.07■□□□□ 0
Trav13-2A0A075B649 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav13-2A0A075B649 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav13-2A0A075B649 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
Trav13-2A0A075B649 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC15.07■□□□□ 0
Trav13-2A0A075B649 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav13-2A0A075B649 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav13-2A0A075B649 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav13-2A0A075B649 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Trav13-2A0A075B649 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav13-2A0A075B649 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Trav13-2A0A075B649 Gm24970-201ENSMUST00000175582 82 ntBASIC15.06■□□□□ 0
Trav13-2A0A075B649 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Trav13-2A0A075B649 Gm17641-201ENSMUST00000166328 2350 ntBASIC15.06■□□□□ 0
Trav13-2A0A075B649 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav13-2A0A075B649 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav13-2A0A075B649 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC15.05■□□□□ 0
Trav13-2A0A075B649 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trav13-2A0A075B649 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav13-2A0A075B649 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav13-2A0A075B649 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms