Protein–RNA interactions for Protein: P41230

Kdm5c, Lysine-specific demethylase 5C, mousemouse

Predictions only

Length 1,554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm5cP41230 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Kdm5cP41230 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC22.34■■□□□ 1.17
Kdm5cP41230 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC22.34■■□□□ 1.17
Kdm5cP41230 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Kdm5cP41230 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Kdm5cP41230 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Kdm5cP41230 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC22.34■■□□□ 1.17
Kdm5cP41230 Gm26596-201ENSMUST00000180464 2655 ntBASIC22.34■■□□□ 1.17
Kdm5cP41230 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
Kdm5cP41230 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC22.33■■□□□ 1.17
Kdm5cP41230 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC22.33■■□□□ 1.17
Kdm5cP41230 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Kdm5cP41230 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Kdm5cP41230 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Kdm5cP41230 Asic1-205ENSMUST00000228185 1818 ntBASIC22.33■■□□□ 1.17
Kdm5cP41230 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC22.33■■□□□ 1.17
Kdm5cP41230 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC22.33■■□□□ 1.17
Kdm5cP41230 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
Kdm5cP41230 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Kdm5cP41230 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Kdm5cP41230 Gm15222-202ENSMUST00000228667 1726 ntBASIC22.33■■□□□ 1.17
Kdm5cP41230 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Kdm5cP41230 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC22.33■■□□□ 1.16
Kdm5cP41230 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC22.33■■□□□ 1.16
Kdm5cP41230 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.16
Kdm5cP41230 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC22.32■■□□□ 1.16
Kdm5cP41230 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Kdm5cP41230 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
Kdm5cP41230 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC22.32■■□□□ 1.16
Kdm5cP41230 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
Kdm5cP41230 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
Kdm5cP41230 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Kdm5cP41230 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Kdm5cP41230 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
Kdm5cP41230 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Kdm5cP41230 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Kdm5cP41230 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Kdm5cP41230 Gm12859-201ENSMUST00000117834 427 ntBASIC22.32■■□□□ 1.16
Kdm5cP41230 Gm6539-201ENSMUST00000119157 1064 ntBASIC22.32■■□□□ 1.16
Kdm5cP41230 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC22.32■■□□□ 1.16
Kdm5cP41230 Gm43703-201ENSMUST00000200523 763 ntBASIC22.32■■□□□ 1.16
Kdm5cP41230 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Kdm5cP41230 Gm6263-201ENSMUST00000120029 1342 ntBASIC22.32■■□□□ 1.16
Kdm5cP41230 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Kdm5cP41230 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Kdm5cP41230 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Kdm5cP41230 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Kdm5cP41230 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
Kdm5cP41230 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Kdm5cP41230 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
Kdm5cP41230 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC22.31■■□□□ 1.16
Kdm5cP41230 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
Kdm5cP41230 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC22.31■■□□□ 1.16
Kdm5cP41230 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Kdm5cP41230 Gm29667-201ENSMUST00000190817 490 ntBASIC22.31■■□□□ 1.16
Kdm5cP41230 Gm18187-201ENSMUST00000196476 984 ntBASIC22.31■■□□□ 1.16
Kdm5cP41230 CT009510.1-201ENSMUST00000227972 270 ntBASIC22.31■■□□□ 1.16
Kdm5cP41230 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Kdm5cP41230 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC22.31■■□□□ 1.16
Kdm5cP41230 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Kdm5cP41230 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
Kdm5cP41230 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Kdm5cP41230 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Kdm5cP41230 Gm9719-201ENSMUST00000162765 543 ntBASIC22.3■■□□□ 1.16
Kdm5cP41230 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Kdm5cP41230 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Kdm5cP41230 Gm42466-201ENSMUST00000202099 1301 ntBASIC22.29■■□□□ 1.16
Kdm5cP41230 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Kdm5cP41230 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Kdm5cP41230 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
Kdm5cP41230 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Kdm5cP41230 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Kdm5cP41230 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Kdm5cP41230 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Kdm5cP41230 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
Kdm5cP41230 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
Kdm5cP41230 Gm5357-201ENSMUST00000212720 1924 ntBASIC22.29■■□□□ 1.16
Kdm5cP41230 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Kdm5cP41230 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
Kdm5cP41230 Ighv8-7-201ENSMUST00000194349 297 ntBASIC22.29■■□□□ 1.16
Kdm5cP41230 CT010506.4-201ENSMUST00000225457 351 ntBASIC22.29■■□□□ 1.16
Kdm5cP41230 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
Kdm5cP41230 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Kdm5cP41230 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Kdm5cP41230 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Kdm5cP41230 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Kdm5cP41230 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
Kdm5cP41230 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
Kdm5cP41230 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
Kdm5cP41230 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC22.28■■□□□ 1.16
Kdm5cP41230 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
Kdm5cP41230 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Kdm5cP41230 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Kdm5cP41230 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Kdm5cP41230 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Kdm5cP41230 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Kdm5cP41230 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Kdm5cP41230 Gm8515-201ENSMUST00000194852 576 ntBASIC22.28■■□□□ 1.16
Kdm5cP41230 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC22.28■■□□□ 1.16
Kdm5cP41230 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms