Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC23.33■■□□□ 1.33
NclP09405 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
NclP09405 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
NclP09405 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
NclP09405 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
NclP09405 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
NclP09405 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
NclP09405 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
NclP09405 AC122901.1-201ENSMUST00000214203 1790 ntBASIC23.32■■□□□ 1.32
NclP09405 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
NclP09405 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
NclP09405 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC23.32■■□□□ 1.32
NclP09405 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
NclP09405 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
NclP09405 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC23.32■■□□□ 1.32
NclP09405 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
NclP09405 Gm19164-201ENSMUST00000210667 640 ntBASIC23.32■■□□□ 1.32
NclP09405 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
NclP09405 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
NclP09405 Gm45412-201ENSMUST00000210217 2275 ntBASIC23.32■■□□□ 1.32
NclP09405 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
NclP09405 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
NclP09405 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
NclP09405 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
NclP09405 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
NclP09405 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
NclP09405 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
NclP09405 AC131586.3-201ENSMUST00000228355 1367 ntBASIC23.31■■□□□ 1.32
NclP09405 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
NclP09405 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
NclP09405 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC23.31■■□□□ 1.32
NclP09405 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
NclP09405 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
NclP09405 Gm2213-201ENSMUST00000197485 688 ntBASIC23.31■■□□□ 1.32
NclP09405 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
NclP09405 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC23.31■■□□□ 1.32
NclP09405 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
NclP09405 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
NclP09405 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
NclP09405 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
NclP09405 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
NclP09405 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
NclP09405 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
NclP09405 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
NclP09405 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
NclP09405 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
NclP09405 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
NclP09405 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
NclP09405 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
NclP09405 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
NclP09405 Gm37153-201ENSMUST00000193637 231 ntBASIC23.3■■□□□ 1.32
NclP09405 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC23.3■■□□□ 1.32
NclP09405 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
NclP09405 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
NclP09405 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC23.3■■□□□ 1.32
NclP09405 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
NclP09405 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
NclP09405 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
NclP09405 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
NclP09405 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
NclP09405 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
NclP09405 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
NclP09405 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC23.29■■□□□ 1.32
NclP09405 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
NclP09405 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC23.29■■□□□ 1.32
NclP09405 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
NclP09405 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
NclP09405 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
NclP09405 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
NclP09405 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC23.29■■□□□ 1.32
NclP09405 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
NclP09405 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
NclP09405 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
NclP09405 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
NclP09405 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
NclP09405 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
NclP09405 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
NclP09405 Gm14494-201ENSMUST00000118786 435 ntBASIC23.28■■□□□ 1.32
NclP09405 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
NclP09405 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
NclP09405 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
NclP09405 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC23.28■■□□□ 1.32
NclP09405 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC23.28■■□□□ 1.32
NclP09405 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
NclP09405 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
NclP09405 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
NclP09405 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
NclP09405 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
NclP09405 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
NclP09405 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
NclP09405 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
NclP09405 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
NclP09405 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
NclP09405 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
NclP09405 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
NclP09405 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
NclP09405 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC23.27■■□□□ 1.32
NclP09405 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
NclP09405 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
NclP09405 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Retrieved 100 of 76,532 protein–RNA pairs in 91.5 ms