Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Gm19430-201ENSMUST00000193847 2137 ntBASIC13.35□□□□□ -0.27
Tnfrsf1aP25118 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC13.35□□□□□ -0.27
Tnfrsf1aP25118 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC13.35□□□□□ -0.27
Tnfrsf1aP25118 AC121577.1-201ENSMUST00000227302 707 ntBASIC13.35□□□□□ -0.27
Tnfrsf1aP25118 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tnfrsf1aP25118 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tnfrsf1aP25118 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Tnfrsf1aP25118 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tnfrsf1aP25118 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tnfrsf1aP25118 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Tnfrsf1aP25118 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tnfrsf1aP25118 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Tnfrsf1aP25118 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tnfrsf1aP25118 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tnfrsf1aP25118 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tnfrsf1aP25118 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC13.35□□□□□ -0.27
Tnfrsf1aP25118 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tnfrsf1aP25118 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Tnfrsf1aP25118 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfrsf1aP25118 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfrsf1aP25118 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfrsf1aP25118 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfrsf1aP25118 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC13.34□□□□□ -0.27
Tnfrsf1aP25118 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfrsf1aP25118 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC13.34□□□□□ -0.27
Tnfrsf1aP25118 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfrsf1aP25118 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfrsf1aP25118 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfrsf1aP25118 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfrsf1aP25118 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfrsf1aP25118 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Tnfrsf1aP25118 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfrsf1aP25118 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
Tnfrsf1aP25118 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfrsf1aP25118 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfrsf1aP25118 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfrsf1aP25118 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfrsf1aP25118 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Tnfrsf1aP25118 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfrsf1aP25118 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC13.34□□□□□ -0.27
Tnfrsf1aP25118 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfrsf1aP25118 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Tnfrsf1aP25118 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfrsf1aP25118 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC13.34□□□□□ -0.27
Tnfrsf1aP25118 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfrsf1aP25118 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Tnfrsf1aP25118 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
Tnfrsf1aP25118 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfrsf1aP25118 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfrsf1aP25118 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Tnfrsf1aP25118 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Tnfrsf1aP25118 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfrsf1aP25118 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfrsf1aP25118 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfrsf1aP25118 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfrsf1aP25118 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfrsf1aP25118 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfrsf1aP25118 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfrsf1aP25118 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfrsf1aP25118 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfrsf1aP25118 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Tnfrsf1aP25118 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Tnfrsf1aP25118 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Tnfrsf1aP25118 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Tnfrsf1aP25118 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tnfrsf1aP25118 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tnfrsf1aP25118 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tnfrsf1aP25118 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tnfrsf1aP25118 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tnfrsf1aP25118 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tnfrsf1aP25118 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tnfrsf1aP25118 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tnfrsf1aP25118 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tnfrsf1aP25118 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Tnfrsf1aP25118 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
Tnfrsf1aP25118 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC13.33□□□□□ -0.28
Tnfrsf1aP25118 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tnfrsf1aP25118 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tnfrsf1aP25118 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tnfrsf1aP25118 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tnfrsf1aP25118 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Tnfrsf1aP25118 Gm45605-201ENSMUST00000210265 4269 ntBASIC13.33□□□□□ -0.28
Tnfrsf1aP25118 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tnfrsf1aP25118 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Tnfrsf1aP25118 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tnfrsf1aP25118 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tnfrsf1aP25118 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Tnfrsf1aP25118 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tnfrsf1aP25118 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tnfrsf1aP25118 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfrsf1aP25118 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfrsf1aP25118 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfrsf1aP25118 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfrsf1aP25118 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfrsf1aP25118 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Tnfrsf1aP25118 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfrsf1aP25118 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfrsf1aP25118 Sybu-209ENSMUST00000228639 4113 ntBASIC13.32□□□□□ -0.28
Tnfrsf1aP25118 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfrsf1aP25118 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms