Protein–RNA interactions for Protein: Q9Z1X9

Cdc45, Cell division control protein 45 homolog, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc45Q9Z1X9 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Cdc45Q9Z1X9 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC26.71■■□□□ 1.87
Cdc45Q9Z1X9 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC26.71■■□□□ 1.87
Cdc45Q9Z1X9 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC26.7■■□□□ 1.87
Cdc45Q9Z1X9 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC26.7■■□□□ 1.86
Cdc45Q9Z1X9 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
Cdc45Q9Z1X9 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Cdc45Q9Z1X9 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC26.69■■□□□ 1.86
Cdc45Q9Z1X9 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Cdc45Q9Z1X9 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Cdc45Q9Z1X9 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Cdc45Q9Z1X9 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Cdc45Q9Z1X9 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Cdc45Q9Z1X9 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Cdc45Q9Z1X9 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Cdc45Q9Z1X9 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Cdc45Q9Z1X9 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Cdc45Q9Z1X9 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Cdc45Q9Z1X9 Gm4419-202ENSMUST00000226239 1431 ntBASIC26.66■■□□□ 1.86
Cdc45Q9Z1X9 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Cdc45Q9Z1X9 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC26.66■■□□□ 1.86
Cdc45Q9Z1X9 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Cdc45Q9Z1X9 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC26.65■■□□□ 1.86
Cdc45Q9Z1X9 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC26.65■■□□□ 1.86
Cdc45Q9Z1X9 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Cdc45Q9Z1X9 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
Cdc45Q9Z1X9 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Cdc45Q9Z1X9 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC26.63■■□□□ 1.85
Cdc45Q9Z1X9 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Cdc45Q9Z1X9 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC26.62■■□□□ 1.85
Cdc45Q9Z1X9 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
Cdc45Q9Z1X9 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
Cdc45Q9Z1X9 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
Cdc45Q9Z1X9 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC26.61■■□□□ 1.85
Cdc45Q9Z1X9 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
Cdc45Q9Z1X9 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
Cdc45Q9Z1X9 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
Cdc45Q9Z1X9 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
Cdc45Q9Z1X9 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Cdc45Q9Z1X9 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC26.59■■□□□ 1.85
Cdc45Q9Z1X9 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC26.59■■□□□ 1.85
Cdc45Q9Z1X9 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Cdc45Q9Z1X9 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Cdc45Q9Z1X9 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
Cdc45Q9Z1X9 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Cdc45Q9Z1X9 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Cdc45Q9Z1X9 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC26.56■■□□□ 1.84
Cdc45Q9Z1X9 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Cdc45Q9Z1X9 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC26.55■■□□□ 1.84
Cdc45Q9Z1X9 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC26.55■■□□□ 1.84
Cdc45Q9Z1X9 Gm13889-201ENSMUST00000099689 1386 ntBASIC26.55■■□□□ 1.84
Cdc45Q9Z1X9 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC26.54■■□□□ 1.84
Cdc45Q9Z1X9 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC26.54■■□□□ 1.84
Cdc45Q9Z1X9 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC26.54■■□□□ 1.84
Cdc45Q9Z1X9 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC26.53■■□□□ 1.84
Cdc45Q9Z1X9 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC26.53■■□□□ 1.84
Cdc45Q9Z1X9 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Cdc45Q9Z1X9 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC26.53■■□□□ 1.84
Cdc45Q9Z1X9 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Cdc45Q9Z1X9 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Cdc45Q9Z1X9 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC26.52■■□□□ 1.84
Cdc45Q9Z1X9 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC26.52■■□□□ 1.84
Cdc45Q9Z1X9 Gm4799-201ENSMUST00000095396 657 ntBASIC26.52■■□□□ 1.84
Cdc45Q9Z1X9 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Cdc45Q9Z1X9 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Cdc45Q9Z1X9 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC26.51■■□□□ 1.83
Cdc45Q9Z1X9 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Cdc45Q9Z1X9 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Cdc45Q9Z1X9 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Cdc45Q9Z1X9 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC26.5■■□□□ 1.83
Cdc45Q9Z1X9 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC26.5■■□□□ 1.83
Cdc45Q9Z1X9 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
Cdc45Q9Z1X9 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC26.48■■□□□ 1.83
Cdc45Q9Z1X9 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC26.48■■□□□ 1.83
Cdc45Q9Z1X9 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC26.48■■□□□ 1.83
Cdc45Q9Z1X9 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC26.48■■□□□ 1.83
Cdc45Q9Z1X9 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC26.47■■□□□ 1.83
Cdc45Q9Z1X9 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC26.47■■□□□ 1.83
Cdc45Q9Z1X9 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Cdc45Q9Z1X9 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Cdc45Q9Z1X9 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC26.47■■□□□ 1.83
Cdc45Q9Z1X9 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Cdc45Q9Z1X9 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Cdc45Q9Z1X9 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC26.46■■□□□ 1.83
Cdc45Q9Z1X9 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC26.46■■□□□ 1.83
Cdc45Q9Z1X9 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC26.45■■□□□ 1.83
Cdc45Q9Z1X9 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC26.45■■□□□ 1.82
Cdc45Q9Z1X9 AC154454.1-201ENSMUST00000225253 216 ntBASIC26.45■■□□□ 1.82
Cdc45Q9Z1X9 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Cdc45Q9Z1X9 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC26.44■■□□□ 1.82
Cdc45Q9Z1X9 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Cdc45Q9Z1X9 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Cdc45Q9Z1X9 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Cdc45Q9Z1X9 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC26.43■■□□□ 1.82
Cdc45Q9Z1X9 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC26.43■■□□□ 1.82
Cdc45Q9Z1X9 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Cdc45Q9Z1X9 Mir3960-201ENSMUST00000198213 73 ntBASIC26.43■■□□□ 1.82
Cdc45Q9Z1X9 AC167019.3-201ENSMUST00000228225 1266 ntBASIC26.43■■□□□ 1.82
Cdc45Q9Z1X9 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Cdc45Q9Z1X9 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC26.43■■□□□ 1.82
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms