Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ClcnkaQ9WUB7 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ClcnkaQ9WUB7 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ClcnkaQ9WUB7 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ClcnkaQ9WUB7 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ClcnkaQ9WUB7 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ClcnkaQ9WUB7 Gm37136-201ENSMUST00000194368 194 ntBASIC21.05■□□□□ 0.96
ClcnkaQ9WUB7 Gm7432-201ENSMUST00000210343 879 ntBASIC21.05■□□□□ 0.96
ClcnkaQ9WUB7 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ClcnkaQ9WUB7 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
ClcnkaQ9WUB7 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ClcnkaQ9WUB7 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
ClcnkaQ9WUB7 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ClcnkaQ9WUB7 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
ClcnkaQ9WUB7 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ClcnkaQ9WUB7 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
ClcnkaQ9WUB7 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ClcnkaQ9WUB7 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ClcnkaQ9WUB7 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ClcnkaQ9WUB7 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ClcnkaQ9WUB7 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ClcnkaQ9WUB7 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
ClcnkaQ9WUB7 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
ClcnkaQ9WUB7 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
ClcnkaQ9WUB7 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ClcnkaQ9WUB7 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ClcnkaQ9WUB7 Gm14121-201ENSMUST00000121441 1380 ntBASIC21■□□□□ 0.95
ClcnkaQ9WUB7 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
ClcnkaQ9WUB7 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
ClcnkaQ9WUB7 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ClcnkaQ9WUB7 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
ClcnkaQ9WUB7 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ClcnkaQ9WUB7 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ClcnkaQ9WUB7 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ClcnkaQ9WUB7 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.98■□□□□ 0.95
ClcnkaQ9WUB7 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ClcnkaQ9WUB7 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
ClcnkaQ9WUB7 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.97■□□□□ 0.95
ClcnkaQ9WUB7 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ClcnkaQ9WUB7 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ClcnkaQ9WUB7 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
ClcnkaQ9WUB7 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ClcnkaQ9WUB7 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ClcnkaQ9WUB7 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ClcnkaQ9WUB7 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ClcnkaQ9WUB7 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.96■□□□□ 0.95
ClcnkaQ9WUB7 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ClcnkaQ9WUB7 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ClcnkaQ9WUB7 Gm11599-201ENSMUST00000118720 878 ntBASIC20.95■□□□□ 0.94
ClcnkaQ9WUB7 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
ClcnkaQ9WUB7 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ClcnkaQ9WUB7 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ClcnkaQ9WUB7 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ClcnkaQ9WUB7 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ClcnkaQ9WUB7 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ClcnkaQ9WUB7 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ClcnkaQ9WUB7 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.93■□□□□ 0.94
ClcnkaQ9WUB7 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.93■□□□□ 0.94
ClcnkaQ9WUB7 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
ClcnkaQ9WUB7 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
ClcnkaQ9WUB7 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ClcnkaQ9WUB7 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
ClcnkaQ9WUB7 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.92■□□□□ 0.94
ClcnkaQ9WUB7 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
ClcnkaQ9WUB7 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ClcnkaQ9WUB7 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
ClcnkaQ9WUB7 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.91■□□□□ 0.94
ClcnkaQ9WUB7 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ClcnkaQ9WUB7 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ClcnkaQ9WUB7 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ClcnkaQ9WUB7 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
ClcnkaQ9WUB7 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ClcnkaQ9WUB7 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ClcnkaQ9WUB7 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ClcnkaQ9WUB7 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ClcnkaQ9WUB7 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ClcnkaQ9WUB7 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ClcnkaQ9WUB7 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ClcnkaQ9WUB7 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ClcnkaQ9WUB7 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ClcnkaQ9WUB7 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ClcnkaQ9WUB7 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ClcnkaQ9WUB7 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ClcnkaQ9WUB7 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ClcnkaQ9WUB7 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ClcnkaQ9WUB7 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ClcnkaQ9WUB7 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ClcnkaQ9WUB7 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC20.83■□□□□ 0.93
ClcnkaQ9WUB7 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
ClcnkaQ9WUB7 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ClcnkaQ9WUB7 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ClcnkaQ9WUB7 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
ClcnkaQ9WUB7 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC20.81■□□□□ 0.92
ClcnkaQ9WUB7 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
ClcnkaQ9WUB7 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ClcnkaQ9WUB7 Gm4799-201ENSMUST00000095396 657 ntBASIC20.81■□□□□ 0.92
ClcnkaQ9WUB7 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
ClcnkaQ9WUB7 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
ClcnkaQ9WUB7 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ClcnkaQ9WUB7 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms