Protein–RNA interactions for Protein: Q9ER80

Rtp4, Receptor-transporting protein 4, mousemouse

Known RBP Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp4Q9ER80 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rtp4Q9ER80 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.46■■□□□ 1.03
Rtp4Q9ER80 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rtp4Q9ER80 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
Rtp4Q9ER80 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Rtp4Q9ER80 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Rtp4Q9ER80 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Rtp4Q9ER80 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Rtp4Q9ER80 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rtp4Q9ER80 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rtp4Q9ER80 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.43■■□□□ 1.02
Rtp4Q9ER80 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Rtp4Q9ER80 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Rtp4Q9ER80 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC21.42■■□□□ 1.02
Rtp4Q9ER80 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Rtp4Q9ER80 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rtp4Q9ER80 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rtp4Q9ER80 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Rtp4Q9ER80 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rtp4Q9ER80 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rtp4Q9ER80 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rtp4Q9ER80 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rtp4Q9ER80 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Rtp4Q9ER80 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Rtp4Q9ER80 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.39■■□□□ 1.02
Rtp4Q9ER80 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Rtp4Q9ER80 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Rtp4Q9ER80 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rtp4Q9ER80 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rtp4Q9ER80 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rtp4Q9ER80 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Rtp4Q9ER80 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Rtp4Q9ER80 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rtp4Q9ER80 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rtp4Q9ER80 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rtp4Q9ER80 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rtp4Q9ER80 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rtp4Q9ER80 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rtp4Q9ER80 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rtp4Q9ER80 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Rtp4Q9ER80 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Rtp4Q9ER80 Cap2-205ENSMUST00000225824 1634 ntBASIC21.34■■□□□ 1.01
Rtp4Q9ER80 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.34■■□□□ 1.01
Rtp4Q9ER80 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Rtp4Q9ER80 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rtp4Q9ER80 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.34■■□□□ 1.01
Rtp4Q9ER80 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rtp4Q9ER80 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rtp4Q9ER80 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Rtp4Q9ER80 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC21.33■■□□□ 1.01
Rtp4Q9ER80 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Rtp4Q9ER80 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Rtp4Q9ER80 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Rtp4Q9ER80 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Rtp4Q9ER80 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.32■■□□□ 1
Rtp4Q9ER80 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC21.32■■□□□ 1
Rtp4Q9ER80 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rtp4Q9ER80 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Rtp4Q9ER80 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rtp4Q9ER80 Gm4799-201ENSMUST00000095396 657 ntBASIC21.31■■□□□ 1
Rtp4Q9ER80 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.31■■□□□ 1
Rtp4Q9ER80 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rtp4Q9ER80 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rtp4Q9ER80 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rtp4Q9ER80 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Rtp4Q9ER80 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rtp4Q9ER80 Gm37136-201ENSMUST00000194368 194 ntBASIC21.3■■□□□ 1
Rtp4Q9ER80 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.3■■□□□ 1
Rtp4Q9ER80 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rtp4Q9ER80 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.29■■□□□ 1
Rtp4Q9ER80 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rtp4Q9ER80 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.29■■□□□ 1
Rtp4Q9ER80 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.29■■□□□ 1
Rtp4Q9ER80 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Rtp4Q9ER80 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rtp4Q9ER80 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Rtp4Q9ER80 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rtp4Q9ER80 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rtp4Q9ER80 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC21.27■■□□□ 1
Rtp4Q9ER80 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rtp4Q9ER80 Scarna2-201ENSMUST00000157560 414 ntBASIC21.27■■□□□ 1
Rtp4Q9ER80 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC21.27■■□□□ 1
Rtp4Q9ER80 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rtp4Q9ER80 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Rtp4Q9ER80 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.27■□□□□ 0.99
Rtp4Q9ER80 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Rtp4Q9ER80 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Rtp4Q9ER80 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC21.26■□□□□ 0.99
Rtp4Q9ER80 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.26■□□□□ 0.99
Rtp4Q9ER80 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.25■□□□□ 0.99
Rtp4Q9ER80 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Rtp4Q9ER80 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
Rtp4Q9ER80 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rtp4Q9ER80 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.24■□□□□ 0.99
Rtp4Q9ER80 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rtp4Q9ER80 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC21.24■□□□□ 0.99
Rtp4Q9ER80 Mir3960-201ENSMUST00000198213 73 ntBASIC21.24■□□□□ 0.99
Rtp4Q9ER80 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rtp4Q9ER80 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rtp4Q9ER80 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms