Protein–RNA interactions for Protein: Q9DC33

Hmg20a, High mobility group protein 20A, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20aQ9DC33 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hmg20aQ9DC33 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hmg20aQ9DC33 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hmg20aQ9DC33 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Hmg20aQ9DC33 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hmg20aQ9DC33 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hmg20aQ9DC33 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hmg20aQ9DC33 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Hmg20aQ9DC33 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Hmg20aQ9DC33 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Hmg20aQ9DC33 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hmg20aQ9DC33 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Hmg20aQ9DC33 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Hmg20aQ9DC33 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hmg20aQ9DC33 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hmg20aQ9DC33 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hmg20aQ9DC33 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hmg20aQ9DC33 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hmg20aQ9DC33 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hmg20aQ9DC33 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hmg20aQ9DC33 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hmg20aQ9DC33 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Hmg20aQ9DC33 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Hmg20aQ9DC33 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Hmg20aQ9DC33 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Hmg20aQ9DC33 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
Hmg20aQ9DC33 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Hmg20aQ9DC33 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.88■□□□□ 0.93
Hmg20aQ9DC33 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Hmg20aQ9DC33 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hmg20aQ9DC33 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hmg20aQ9DC33 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Hmg20aQ9DC33 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hmg20aQ9DC33 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hmg20aQ9DC33 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hmg20aQ9DC33 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.87■□□□□ 0.93
Hmg20aQ9DC33 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC20.87■□□□□ 0.93
Hmg20aQ9DC33 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Hmg20aQ9DC33 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Hmg20aQ9DC33 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hmg20aQ9DC33 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Hmg20aQ9DC33 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Hmg20aQ9DC33 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Hmg20aQ9DC33 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hmg20aQ9DC33 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Hmg20aQ9DC33 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Hmg20aQ9DC33 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Hmg20aQ9DC33 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hmg20aQ9DC33 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.84■□□□□ 0.93
Hmg20aQ9DC33 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Hmg20aQ9DC33 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Hmg20aQ9DC33 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Hmg20aQ9DC33 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Hmg20aQ9DC33 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Hmg20aQ9DC33 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Hmg20aQ9DC33 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Hmg20aQ9DC33 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC20.83■□□□□ 0.92
Hmg20aQ9DC33 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
Hmg20aQ9DC33 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
Hmg20aQ9DC33 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hmg20aQ9DC33 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hmg20aQ9DC33 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hmg20aQ9DC33 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hmg20aQ9DC33 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hmg20aQ9DC33 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.81■□□□□ 0.92
Hmg20aQ9DC33 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.81■□□□□ 0.92
Hmg20aQ9DC33 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hmg20aQ9DC33 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hmg20aQ9DC33 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hmg20aQ9DC33 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.8■□□□□ 0.92
Hmg20aQ9DC33 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Hmg20aQ9DC33 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Hmg20aQ9DC33 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Hmg20aQ9DC33 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Hmg20aQ9DC33 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Hmg20aQ9DC33 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Hmg20aQ9DC33 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
Hmg20aQ9DC33 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.78■□□□□ 0.92
Hmg20aQ9DC33 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hmg20aQ9DC33 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Hmg20aQ9DC33 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hmg20aQ9DC33 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hmg20aQ9DC33 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Hmg20aQ9DC33 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Hmg20aQ9DC33 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Hmg20aQ9DC33 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Hmg20aQ9DC33 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Hmg20aQ9DC33 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Hmg20aQ9DC33 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Hmg20aQ9DC33 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Hmg20aQ9DC33 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.76■□□□□ 0.91
Hmg20aQ9DC33 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Hmg20aQ9DC33 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
Hmg20aQ9DC33 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.75■□□□□ 0.91
Hmg20aQ9DC33 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hmg20aQ9DC33 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Hmg20aQ9DC33 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hmg20aQ9DC33 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Hmg20aQ9DC33 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hmg20aQ9DC33 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 74.9 ms