Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Gm10420-201ENSMUST00000121713 882 ntBASIC22.76■■□□□ 1.23
Rrp8Q9DB85 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Rrp8Q9DB85 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Rrp8Q9DB85 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC22.76■■□□□ 1.23
Rrp8Q9DB85 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Rrp8Q9DB85 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Rrp8Q9DB85 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC22.75■■□□□ 1.23
Rrp8Q9DB85 Terc-201ENSMUST00000082862 423 ntBASIC22.75■■□□□ 1.23
Rrp8Q9DB85 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Rrp8Q9DB85 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Rrp8Q9DB85 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Rrp8Q9DB85 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Rrp8Q9DB85 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Rrp8Q9DB85 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC22.74■■□□□ 1.23
Rrp8Q9DB85 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC22.74■■□□□ 1.23
Rrp8Q9DB85 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Rrp8Q9DB85 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Rrp8Q9DB85 Gm43445-201ENSMUST00000198564 2091 ntBASIC22.73■■□□□ 1.23
Rrp8Q9DB85 AC151971.4-201ENSMUST00000214717 704 ntBASIC22.73■■□□□ 1.23
Rrp8Q9DB85 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Rrp8Q9DB85 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Rrp8Q9DB85 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Rrp8Q9DB85 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
Rrp8Q9DB85 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Rrp8Q9DB85 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Rrp8Q9DB85 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC22.71■■□□□ 1.23
Rrp8Q9DB85 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC22.71■■□□□ 1.23
Rrp8Q9DB85 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC22.71■■□□□ 1.23
Rrp8Q9DB85 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
Rrp8Q9DB85 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Rrp8Q9DB85 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Rrp8Q9DB85 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
Rrp8Q9DB85 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC22.7■■□□□ 1.22
Rrp8Q9DB85 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Rrp8Q9DB85 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Rrp8Q9DB85 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
Rrp8Q9DB85 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Rrp8Q9DB85 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC22.68■■□□□ 1.22
Rrp8Q9DB85 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Rrp8Q9DB85 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Rrp8Q9DB85 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Rrp8Q9DB85 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
Rrp8Q9DB85 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
Rrp8Q9DB85 Gm37847-201ENSMUST00000192163 1497 ntBASIC22.67■■□□□ 1.22
Rrp8Q9DB85 Gm31748-201ENSMUST00000194938 1497 ntBASIC22.67■■□□□ 1.22
Rrp8Q9DB85 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC22.67■■□□□ 1.22
Rrp8Q9DB85 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC22.67■■□□□ 1.22
Rrp8Q9DB85 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
Rrp8Q9DB85 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Rrp8Q9DB85 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Rrp8Q9DB85 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Rrp8Q9DB85 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Rrp8Q9DB85 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Rrp8Q9DB85 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Rrp8Q9DB85 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Rrp8Q9DB85 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
Rrp8Q9DB85 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Rrp8Q9DB85 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Rrp8Q9DB85 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Rrp8Q9DB85 Gm5921-201ENSMUST00000075898 882 ntBASIC22.64■■□□□ 1.21
Rrp8Q9DB85 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
Rrp8Q9DB85 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Rrp8Q9DB85 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Rrp8Q9DB85 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC22.62■■□□□ 1.21
Rrp8Q9DB85 Gm14121-201ENSMUST00000121441 1380 ntBASIC22.62■■□□□ 1.21
Rrp8Q9DB85 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Rrp8Q9DB85 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
Rrp8Q9DB85 Gm5812-201ENSMUST00000061073 957 ntBASIC22.61■■□□□ 1.21
Rrp8Q9DB85 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
Rrp8Q9DB85 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC22.6■■□□□ 1.21
Rrp8Q9DB85 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Rrp8Q9DB85 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC22.6■■□□□ 1.21
Rrp8Q9DB85 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Rrp8Q9DB85 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC22.58■■□□□ 1.21
Rrp8Q9DB85 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Rrp8Q9DB85 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Rrp8Q9DB85 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Rrp8Q9DB85 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Rrp8Q9DB85 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
Rrp8Q9DB85 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Rrp8Q9DB85 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Rrp8Q9DB85 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Rrp8Q9DB85 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC22.55■■□□□ 1.2
Rrp8Q9DB85 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Rrp8Q9DB85 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Rrp8Q9DB85 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Rrp8Q9DB85 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Rrp8Q9DB85 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC22.54■■□□□ 1.2
Rrp8Q9DB85 Gm44428-201ENSMUST00000204474 874 ntBASIC22.54■■□□□ 1.2
Rrp8Q9DB85 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Rrp8Q9DB85 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Rrp8Q9DB85 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Rrp8Q9DB85 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
Rrp8Q9DB85 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Rrp8Q9DB85 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Rrp8Q9DB85 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Rrp8Q9DB85 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Rrp8Q9DB85 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Rrp8Q9DB85 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
Rrp8Q9DB85 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms