Protein–RNA interactions for Protein: Q9D5J6

Shpk, Sedoheptulokinase, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShpkQ9D5J6 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ShpkQ9D5J6 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ShpkQ9D5J6 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ShpkQ9D5J6 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.26■□□□□ 0.67
ShpkQ9D5J6 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.26■□□□□ 0.67
ShpkQ9D5J6 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ShpkQ9D5J6 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
ShpkQ9D5J6 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
ShpkQ9D5J6 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ShpkQ9D5J6 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.25■□□□□ 0.67
ShpkQ9D5J6 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ShpkQ9D5J6 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ShpkQ9D5J6 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ShpkQ9D5J6 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ShpkQ9D5J6 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC19.24■□□□□ 0.67
ShpkQ9D5J6 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ShpkQ9D5J6 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ShpkQ9D5J6 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
ShpkQ9D5J6 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
ShpkQ9D5J6 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
ShpkQ9D5J6 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
ShpkQ9D5J6 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ShpkQ9D5J6 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
ShpkQ9D5J6 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ShpkQ9D5J6 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ShpkQ9D5J6 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.22■□□□□ 0.67
ShpkQ9D5J6 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC19.22■□□□□ 0.67
ShpkQ9D5J6 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ShpkQ9D5J6 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ShpkQ9D5J6 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
ShpkQ9D5J6 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ShpkQ9D5J6 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ShpkQ9D5J6 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ShpkQ9D5J6 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ShpkQ9D5J6 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ShpkQ9D5J6 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ShpkQ9D5J6 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ShpkQ9D5J6 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC19.2■□□□□ 0.66
ShpkQ9D5J6 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC19.2■□□□□ 0.66
ShpkQ9D5J6 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ShpkQ9D5J6 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ShpkQ9D5J6 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ShpkQ9D5J6 Peli2-204ENSMUST00000226513 1320 ntBASIC19.2■□□□□ 0.66
ShpkQ9D5J6 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ShpkQ9D5J6 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
ShpkQ9D5J6 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ShpkQ9D5J6 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ShpkQ9D5J6 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ShpkQ9D5J6 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
ShpkQ9D5J6 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ShpkQ9D5J6 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
ShpkQ9D5J6 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ShpkQ9D5J6 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC19.19■□□□□ 0.66
ShpkQ9D5J6 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ShpkQ9D5J6 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ShpkQ9D5J6 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ShpkQ9D5J6 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ShpkQ9D5J6 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ShpkQ9D5J6 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
ShpkQ9D5J6 Gm27322-201ENSMUST00000184007 104 ntBASIC19.18■□□□□ 0.66
ShpkQ9D5J6 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
ShpkQ9D5J6 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
ShpkQ9D5J6 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
ShpkQ9D5J6 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
ShpkQ9D5J6 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ShpkQ9D5J6 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.17■□□□□ 0.66
ShpkQ9D5J6 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.17■□□□□ 0.66
ShpkQ9D5J6 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ShpkQ9D5J6 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ShpkQ9D5J6 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
ShpkQ9D5J6 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ShpkQ9D5J6 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ShpkQ9D5J6 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
ShpkQ9D5J6 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ShpkQ9D5J6 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC19.15■□□□□ 0.66
ShpkQ9D5J6 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
ShpkQ9D5J6 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ShpkQ9D5J6 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ShpkQ9D5J6 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
ShpkQ9D5J6 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC19.13■□□□□ 0.65
ShpkQ9D5J6 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ShpkQ9D5J6 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ShpkQ9D5J6 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.12■□□□□ 0.65
ShpkQ9D5J6 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
ShpkQ9D5J6 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ShpkQ9D5J6 Gm17082-201ENSMUST00000166043 1091 ntBASIC19.12■□□□□ 0.65
ShpkQ9D5J6 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC19.12■□□□□ 0.65
ShpkQ9D5J6 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.12■□□□□ 0.65
ShpkQ9D5J6 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ShpkQ9D5J6 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ShpkQ9D5J6 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC19.11■□□□□ 0.65
ShpkQ9D5J6 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ShpkQ9D5J6 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ShpkQ9D5J6 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ShpkQ9D5J6 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ShpkQ9D5J6 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ShpkQ9D5J6 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ShpkQ9D5J6 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ShpkQ9D5J6 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ShpkQ9D5J6 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms