Protein–RNA interactions for Protein: Q9CZG9

Pdzd11, PDZ domain-containing protein 11, mousemouse

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdzd11Q9CZG9 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pdzd11Q9CZG9 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pdzd11Q9CZG9 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pdzd11Q9CZG9 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pdzd11Q9CZG9 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Pdzd11Q9CZG9 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pdzd11Q9CZG9 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pdzd11Q9CZG9 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pdzd11Q9CZG9 AL845457.1-201ENSMUST00000197244 68 ntBASIC18.06■□□□□ 0.48
Pdzd11Q9CZG9 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pdzd11Q9CZG9 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC18.06■□□□□ 0.48
Pdzd11Q9CZG9 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pdzd11Q9CZG9 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pdzd11Q9CZG9 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Pdzd11Q9CZG9 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pdzd11Q9CZG9 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Pdzd11Q9CZG9 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Pdzd11Q9CZG9 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Pdzd11Q9CZG9 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pdzd11Q9CZG9 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pdzd11Q9CZG9 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pdzd11Q9CZG9 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pdzd11Q9CZG9 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pdzd11Q9CZG9 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Pdzd11Q9CZG9 Gm13042-201ENSMUST00000119244 1955 ntBASIC18.03■□□□□ 0.48
Pdzd11Q9CZG9 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pdzd11Q9CZG9 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC18.02■□□□□ 0.48
Pdzd11Q9CZG9 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pdzd11Q9CZG9 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pdzd11Q9CZG9 Dmtn-209ENSMUST00000228295 2572 ntBASIC18.01■□□□□ 0.47
Pdzd11Q9CZG9 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pdzd11Q9CZG9 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
Pdzd11Q9CZG9 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pdzd11Q9CZG9 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pdzd11Q9CZG9 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
Pdzd11Q9CZG9 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pdzd11Q9CZG9 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pdzd11Q9CZG9 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC18.01■□□□□ 0.47
Pdzd11Q9CZG9 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pdzd11Q9CZG9 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pdzd11Q9CZG9 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pdzd11Q9CZG9 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pdzd11Q9CZG9 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pdzd11Q9CZG9 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pdzd11Q9CZG9 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Pdzd11Q9CZG9 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC17.98■□□□□ 0.47
Pdzd11Q9CZG9 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pdzd11Q9CZG9 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pdzd11Q9CZG9 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pdzd11Q9CZG9 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pdzd11Q9CZG9 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Pdzd11Q9CZG9 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pdzd11Q9CZG9 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Pdzd11Q9CZG9 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pdzd11Q9CZG9 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Pdzd11Q9CZG9 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pdzd11Q9CZG9 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Pdzd11Q9CZG9 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Pdzd11Q9CZG9 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pdzd11Q9CZG9 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pdzd11Q9CZG9 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pdzd11Q9CZG9 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Pdzd11Q9CZG9 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.96■□□□□ 0.47
Pdzd11Q9CZG9 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Pdzd11Q9CZG9 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pdzd11Q9CZG9 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.95■□□□□ 0.46
Pdzd11Q9CZG9 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pdzd11Q9CZG9 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pdzd11Q9CZG9 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Pdzd11Q9CZG9 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pdzd11Q9CZG9 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pdzd11Q9CZG9 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pdzd11Q9CZG9 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pdzd11Q9CZG9 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Pdzd11Q9CZG9 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Pdzd11Q9CZG9 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pdzd11Q9CZG9 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
Pdzd11Q9CZG9 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.94■□□□□ 0.46
Pdzd11Q9CZG9 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pdzd11Q9CZG9 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pdzd11Q9CZG9 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pdzd11Q9CZG9 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pdzd11Q9CZG9 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Pdzd11Q9CZG9 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pdzd11Q9CZG9 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Pdzd11Q9CZG9 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC17.91■□□□□ 0.46
Pdzd11Q9CZG9 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Pdzd11Q9CZG9 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pdzd11Q9CZG9 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pdzd11Q9CZG9 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pdzd11Q9CZG9 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pdzd11Q9CZG9 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Pdzd11Q9CZG9 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pdzd11Q9CZG9 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pdzd11Q9CZG9 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pdzd11Q9CZG9 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pdzd11Q9CZG9 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pdzd11Q9CZG9 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pdzd11Q9CZG9 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pdzd11Q9CZG9 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms