Protein–RNA interactions for Protein: Q9CR55

UPF0547 protein C16orf87 homolog, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CR55 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Q9CR55 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Q9CR55 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Q9CR55 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
Q9CR55 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
Q9CR55 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Q9CR55 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Q9CR55 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Q9CR55 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Q9CR55 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Q9CR55 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Q9CR55 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.11■□□□□ 0.97
Q9CR55 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Q9CR55 Notumos-201ENSMUST00000151998 2659 ntBASIC21.11■□□□□ 0.97
Q9CR55 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Q9CR55 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Q9CR55 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC21.11■□□□□ 0.97
Q9CR55 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Q9CR55 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Q9CR55 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Q9CR55 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Q9CR55 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Q9CR55 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Q9CR55 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Q9CR55 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Q9CR55 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
Q9CR55 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Q9CR55 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Q9CR55 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Q9CR55 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Q9CR55 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Q9CR55 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Q9CR55 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Q9CR55 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Q9CR55 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Q9CR55 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Q9CR55 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC21.05■□□□□ 0.96
Q9CR55 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Q9CR55 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.05■□□□□ 0.96
Q9CR55 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC21.05■□□□□ 0.96
Q9CR55 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Q9CR55 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.04■□□□□ 0.96
Q9CR55 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Q9CR55 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Q9CR55 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Q9CR55 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Q9CR55 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Q9CR55 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Q9CR55 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Q9CR55 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Q9CR55 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Q9CR55 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Q9CR55 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Q9CR55 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Q9CR55 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Q9CR55 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Q9CR55 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Q9CR55 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Q9CR55 Gm16148-201ENSMUST00000119653 893 ntBASIC21.01■□□□□ 0.95
Q9CR55 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC21.01■□□□□ 0.95
Q9CR55 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.01■□□□□ 0.95
Q9CR55 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Q9CR55 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC21■□□□□ 0.95
Q9CR55 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Q9CR55 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Q9CR55 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
Q9CR55 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21■□□□□ 0.95
Q9CR55 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Q9CR55 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Q9CR55 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Q9CR55 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Q9CR55 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Q9CR55 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Q9CR55 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Q9CR55 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Q9CR55 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Q9CR55 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Q9CR55 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Q9CR55 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Q9CR55 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.97■□□□□ 0.95
Q9CR55 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Q9CR55 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Q9CR55 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Q9CR55 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Q9CR55 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Q9CR55 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Q9CR55 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Q9CR55 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Q9CR55 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Q9CR55 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Q9CR55 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Q9CR55 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Q9CR55 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Q9CR55 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Q9CR55 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Q9CR55 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Q9CR55 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Q9CR55 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Q9CR55 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Q9CR55 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 72.5 ms