Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Lsm7Q9CQQ8 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Lsm7Q9CQQ8 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Lsm7Q9CQQ8 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC23.28■■□□□ 1.32
Lsm7Q9CQQ8 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
Lsm7Q9CQQ8 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Lsm7Q9CQQ8 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Lsm7Q9CQQ8 AC153911.1-201ENSMUST00000220378 758 ntBASIC23.27■■□□□ 1.32
Lsm7Q9CQQ8 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Lsm7Q9CQQ8 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Lsm7Q9CQQ8 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Lsm7Q9CQQ8 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Lsm7Q9CQQ8 Cap2-205ENSMUST00000225824 1634 ntBASIC23.26■■□□□ 1.31
Lsm7Q9CQQ8 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Lsm7Q9CQQ8 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Lsm7Q9CQQ8 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Lsm7Q9CQQ8 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Lsm7Q9CQQ8 Gm9910-201ENSMUST00000195385 1550 ntBASIC23.24■■□□□ 1.31
Lsm7Q9CQQ8 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC23.24■■□□□ 1.31
Lsm7Q9CQQ8 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Lsm7Q9CQQ8 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
Lsm7Q9CQQ8 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Lsm7Q9CQQ8 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC23.23■■□□□ 1.31
Lsm7Q9CQQ8 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Lsm7Q9CQQ8 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Lsm7Q9CQQ8 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Lsm7Q9CQQ8 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Lsm7Q9CQQ8 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Lsm7Q9CQQ8 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Lsm7Q9CQQ8 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC23.22■■□□□ 1.31
Lsm7Q9CQQ8 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
Lsm7Q9CQQ8 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Lsm7Q9CQQ8 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Lsm7Q9CQQ8 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
Lsm7Q9CQQ8 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
Lsm7Q9CQQ8 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Lsm7Q9CQQ8 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Lsm7Q9CQQ8 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Lsm7Q9CQQ8 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Lsm7Q9CQQ8 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Lsm7Q9CQQ8 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
Lsm7Q9CQQ8 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Lsm7Q9CQQ8 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC23.19■■□□□ 1.3
Lsm7Q9CQQ8 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Lsm7Q9CQQ8 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Lsm7Q9CQQ8 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
Lsm7Q9CQQ8 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Lsm7Q9CQQ8 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
Lsm7Q9CQQ8 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC23.19■■□□□ 1.3
Lsm7Q9CQQ8 Terc-201ENSMUST00000082862 423 ntBASIC23.19■■□□□ 1.3
Lsm7Q9CQQ8 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Lsm7Q9CQQ8 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
Lsm7Q9CQQ8 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Lsm7Q9CQQ8 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Lsm7Q9CQQ8 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Lsm7Q9CQQ8 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Lsm7Q9CQQ8 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
Lsm7Q9CQQ8 Gm4419-202ENSMUST00000226239 1431 ntBASIC23.17■■□□□ 1.3
Lsm7Q9CQQ8 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Lsm7Q9CQQ8 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC23.17■■□□□ 1.3
Lsm7Q9CQQ8 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Lsm7Q9CQQ8 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Lsm7Q9CQQ8 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC23.16■■□□□ 1.3
Lsm7Q9CQQ8 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Lsm7Q9CQQ8 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Lsm7Q9CQQ8 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Lsm7Q9CQQ8 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Lsm7Q9CQQ8 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Lsm7Q9CQQ8 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Lsm7Q9CQQ8 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Lsm7Q9CQQ8 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Lsm7Q9CQQ8 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC23.12■■□□□ 1.29
Lsm7Q9CQQ8 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Lsm7Q9CQQ8 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Lsm7Q9CQQ8 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC23.11■■□□□ 1.29
Lsm7Q9CQQ8 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC23.11■■□□□ 1.29
Lsm7Q9CQQ8 Gm12366-201ENSMUST00000121722 873 ntBASIC23.11■■□□□ 1.29
Lsm7Q9CQQ8 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC23.11■■□□□ 1.29
Lsm7Q9CQQ8 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC23.11■■□□□ 1.29
Lsm7Q9CQQ8 Gm5786-201ENSMUST00000085368 882 ntBASIC23.11■■□□□ 1.29
Lsm7Q9CQQ8 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Lsm7Q9CQQ8 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Lsm7Q9CQQ8 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Lsm7Q9CQQ8 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Lsm7Q9CQQ8 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
Lsm7Q9CQQ8 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Lsm7Q9CQQ8 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Lsm7Q9CQQ8 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC23.09■■□□□ 1.29
Lsm7Q9CQQ8 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Lsm7Q9CQQ8 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Lsm7Q9CQQ8 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Lsm7Q9CQQ8 Gm27502-201ENSMUST00000183495 199 ntBASIC23.08■■□□□ 1.29
Lsm7Q9CQQ8 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC23.08■■□□□ 1.29
Lsm7Q9CQQ8 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Lsm7Q9CQQ8 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Lsm7Q9CQQ8 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Lsm7Q9CQQ8 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC23.07■■□□□ 1.28
Lsm7Q9CQQ8 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Lsm7Q9CQQ8 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Lsm7Q9CQQ8 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC23.07■■□□□ 1.28
Retrieved 100 of 76,532 protein–RNA pairs in 1042.5 ms