Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Pcdh15Q99PJ1 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Pcdh15Q99PJ1 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
Pcdh15Q99PJ1 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC27.33■■□□□ 1.97
Pcdh15Q99PJ1 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC27.33■■□□□ 1.97
Pcdh15Q99PJ1 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Pcdh15Q99PJ1 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Pcdh15Q99PJ1 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC27.31■■□□□ 1.96
Pcdh15Q99PJ1 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC27.31■■□□□ 1.96
Pcdh15Q99PJ1 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
Pcdh15Q99PJ1 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
Pcdh15Q99PJ1 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC27.3■■□□□ 1.96
Pcdh15Q99PJ1 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC27.29■■□□□ 1.96
Pcdh15Q99PJ1 Terc-201ENSMUST00000082862 423 ntBASIC27.29■■□□□ 1.96
Pcdh15Q99PJ1 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Pcdh15Q99PJ1 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC27.29■■□□□ 1.96
Pcdh15Q99PJ1 AC093043.1-201ENSMUST00000226700 898 ntBASIC27.28■■□□□ 1.96
Pcdh15Q99PJ1 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC27.27■■□□□ 1.96
Pcdh15Q99PJ1 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC27.26■■□□□ 1.96
Pcdh15Q99PJ1 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC27.26■■□□□ 1.95
Pcdh15Q99PJ1 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
Pcdh15Q99PJ1 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC27.26■■□□□ 1.95
Pcdh15Q99PJ1 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
Pcdh15Q99PJ1 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
Pcdh15Q99PJ1 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Pcdh15Q99PJ1 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC27.25■■□□□ 1.95
Pcdh15Q99PJ1 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Pcdh15Q99PJ1 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Pcdh15Q99PJ1 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC27.24■■□□□ 1.95
Pcdh15Q99PJ1 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC27.24■■□□□ 1.95
Pcdh15Q99PJ1 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC27.24■■□□□ 1.95
Pcdh15Q99PJ1 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
Pcdh15Q99PJ1 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC27.24■■□□□ 1.95
Pcdh15Q99PJ1 Gm43566-201ENSMUST00000196851 808 ntBASIC27.24■■□□□ 1.95
Pcdh15Q99PJ1 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC27.24■■□□□ 1.95
Pcdh15Q99PJ1 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
Pcdh15Q99PJ1 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
Pcdh15Q99PJ1 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC27.23■■□□□ 1.95
Pcdh15Q99PJ1 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
Pcdh15Q99PJ1 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Pcdh15Q99PJ1 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Pcdh15Q99PJ1 AC153911.1-201ENSMUST00000220378 758 ntBASIC27.22■■□□□ 1.95
Pcdh15Q99PJ1 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Pcdh15Q99PJ1 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC27.21■■□□□ 1.95
Pcdh15Q99PJ1 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC27.21■■□□□ 1.95
Pcdh15Q99PJ1 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Pcdh15Q99PJ1 Gm13238-201ENSMUST00000117655 780 ntBASIC27.2■■□□□ 1.95
Pcdh15Q99PJ1 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
Pcdh15Q99PJ1 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Pcdh15Q99PJ1 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC27.19■■□□□ 1.94
Pcdh15Q99PJ1 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
Pcdh15Q99PJ1 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Pcdh15Q99PJ1 Gm14121-201ENSMUST00000121441 1380 ntBASIC27.18■■□□□ 1.94
Pcdh15Q99PJ1 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
Pcdh15Q99PJ1 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC27.18■■□□□ 1.94
Pcdh15Q99PJ1 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC27.17■■□□□ 1.94
Pcdh15Q99PJ1 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Pcdh15Q99PJ1 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC27.16■■□□□ 1.94
Pcdh15Q99PJ1 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC27.16■■□□□ 1.94
Pcdh15Q99PJ1 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC27.16■■□□□ 1.94
Pcdh15Q99PJ1 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC27.16■■□□□ 1.94
Pcdh15Q99PJ1 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC27.16■■□□□ 1.94
Pcdh15Q99PJ1 Gm14117-201ENSMUST00000122417 843 ntBASIC27.16■■□□□ 1.94
Pcdh15Q99PJ1 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
Pcdh15Q99PJ1 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC27.14■■□□□ 1.93
Pcdh15Q99PJ1 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
Pcdh15Q99PJ1 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC27.13■■□□□ 1.93
Pcdh15Q99PJ1 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC27.13■■□□□ 1.93
Pcdh15Q99PJ1 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC27.13■■□□□ 1.93
Pcdh15Q99PJ1 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC27.12■■□□□ 1.93
Pcdh15Q99PJ1 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC27.12■■□□□ 1.93
Pcdh15Q99PJ1 Gm15820-201ENSMUST00000201566 728 ntBASIC27.12■■□□□ 1.93
Pcdh15Q99PJ1 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Pcdh15Q99PJ1 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
Pcdh15Q99PJ1 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC27.12■■□□□ 1.93
Pcdh15Q99PJ1 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Pcdh15Q99PJ1 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Pcdh15Q99PJ1 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
Pcdh15Q99PJ1 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
Pcdh15Q99PJ1 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC27.1■■□□□ 1.93
Pcdh15Q99PJ1 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC27.1■■□□□ 1.93
Pcdh15Q99PJ1 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Pcdh15Q99PJ1 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Pcdh15Q99PJ1 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Pcdh15Q99PJ1 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC27.09■■□□□ 1.93
Pcdh15Q99PJ1 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
Pcdh15Q99PJ1 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
Pcdh15Q99PJ1 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Pcdh15Q99PJ1 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Pcdh15Q99PJ1 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC27.08■■□□□ 1.93
Pcdh15Q99PJ1 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC27.08■■□□□ 1.93
Pcdh15Q99PJ1 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC27.06■■□□□ 1.92
Pcdh15Q99PJ1 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
Pcdh15Q99PJ1 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Pcdh15Q99PJ1 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Pcdh15Q99PJ1 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
Pcdh15Q99PJ1 Rps24-207ENSMUST00000224568 714 ntBASIC27.05■■□□□ 1.92
Pcdh15Q99PJ1 Gm43592-201ENSMUST00000196922 1165 ntBASIC27.04■■□□□ 1.92
Pcdh15Q99PJ1 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Pcdh15Q99PJ1 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms