Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC22.75■■□□□ 1.23
Pcdhb4Q91XZ6 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC22.75■■□□□ 1.23
Pcdhb4Q91XZ6 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Pcdhb4Q91XZ6 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC22.75■■□□□ 1.23
Pcdhb4Q91XZ6 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Pcdhb4Q91XZ6 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Pcdhb4Q91XZ6 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC22.75■■□□□ 1.23
Pcdhb4Q91XZ6 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Pcdhb4Q91XZ6 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Pcdhb4Q91XZ6 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC22.74■■□□□ 1.23
Pcdhb4Q91XZ6 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Pcdhb4Q91XZ6 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Pcdhb4Q91XZ6 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Pcdhb4Q91XZ6 Il17rd-202ENSMUST00000223942 2186 ntBASIC22.72■■□□□ 1.23
Pcdhb4Q91XZ6 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
Pcdhb4Q91XZ6 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC22.72■■□□□ 1.23
Pcdhb4Q91XZ6 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Pcdhb4Q91XZ6 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC22.71■■□□□ 1.23
Pcdhb4Q91XZ6 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Pcdhb4Q91XZ6 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.23
Pcdhb4Q91XZ6 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC22.7■■□□□ 1.22
Pcdhb4Q91XZ6 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC22.7■■□□□ 1.22
Pcdhb4Q91XZ6 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
Pcdhb4Q91XZ6 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC22.7■■□□□ 1.22
Pcdhb4Q91XZ6 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Pcdhb4Q91XZ6 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
Pcdhb4Q91XZ6 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Pcdhb4Q91XZ6 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Pcdhb4Q91XZ6 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Pcdhb4Q91XZ6 Gm9939-201ENSMUST00000067161 1154 ntBASIC22.69■■□□□ 1.22
Pcdhb4Q91XZ6 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC22.68■■□□□ 1.22
Pcdhb4Q91XZ6 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Pcdhb4Q91XZ6 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
Pcdhb4Q91XZ6 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC22.67■■□□□ 1.22
Pcdhb4Q91XZ6 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC22.67■■□□□ 1.22
Pcdhb4Q91XZ6 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Pcdhb4Q91XZ6 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Pcdhb4Q91XZ6 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Pcdhb4Q91XZ6 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Pcdhb4Q91XZ6 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Pcdhb4Q91XZ6 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Pcdhb4Q91XZ6 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Pcdhb4Q91XZ6 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Pcdhb4Q91XZ6 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Pcdhb4Q91XZ6 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
Pcdhb4Q91XZ6 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
Pcdhb4Q91XZ6 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
Pcdhb4Q91XZ6 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Pcdhb4Q91XZ6 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Pcdhb4Q91XZ6 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Pcdhb4Q91XZ6 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Pcdhb4Q91XZ6 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Pcdhb4Q91XZ6 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC22.62■■□□□ 1.21
Pcdhb4Q91XZ6 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Pcdhb4Q91XZ6 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
Pcdhb4Q91XZ6 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Pcdhb4Q91XZ6 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Pcdhb4Q91XZ6 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
Pcdhb4Q91XZ6 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC22.61■■□□□ 1.21
Pcdhb4Q91XZ6 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC22.61■■□□□ 1.21
Pcdhb4Q91XZ6 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Pcdhb4Q91XZ6 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Pcdhb4Q91XZ6 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Pcdhb4Q91XZ6 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Pcdhb4Q91XZ6 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC22.6■■□□□ 1.21
Pcdhb4Q91XZ6 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Pcdhb4Q91XZ6 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Pcdhb4Q91XZ6 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Pcdhb4Q91XZ6 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Pcdhb4Q91XZ6 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC22.58■■□□□ 1.21
Pcdhb4Q91XZ6 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC22.58■■□□□ 1.21
Pcdhb4Q91XZ6 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Pcdhb4Q91XZ6 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
Pcdhb4Q91XZ6 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Pcdhb4Q91XZ6 Gm6821-201ENSMUST00000107540 542 ntBASIC22.57■■□□□ 1.2
Pcdhb4Q91XZ6 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Pcdhb4Q91XZ6 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC22.57■■□□□ 1.2
Pcdhb4Q91XZ6 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC22.57■■□□□ 1.2
Pcdhb4Q91XZ6 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
Pcdhb4Q91XZ6 Gm14121-201ENSMUST00000121441 1380 ntBASIC22.56■■□□□ 1.2
Pcdhb4Q91XZ6 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Pcdhb4Q91XZ6 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Pcdhb4Q91XZ6 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Pcdhb4Q91XZ6 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Pcdhb4Q91XZ6 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Pcdhb4Q91XZ6 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Pcdhb4Q91XZ6 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
Pcdhb4Q91XZ6 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Pcdhb4Q91XZ6 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Pcdhb4Q91XZ6 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Pcdhb4Q91XZ6 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Pcdhb4Q91XZ6 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
Pcdhb4Q91XZ6 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Pcdhb4Q91XZ6 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Pcdhb4Q91XZ6 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
Pcdhb4Q91XZ6 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Pcdhb4Q91XZ6 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Pcdhb4Q91XZ6 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Pcdhb4Q91XZ6 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Pcdhb4Q91XZ6 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms