Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC22.02■■□□□ 1.12
Pcdhga11Q91XY8 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Pcdhga11Q91XY8 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC22.02■■□□□ 1.12
Pcdhga11Q91XY8 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Pcdhga11Q91XY8 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
Pcdhga11Q91XY8 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Pcdhga11Q91XY8 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC22.01■■□□□ 1.11
Pcdhga11Q91XY8 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC22■■□□□ 1.11
Pcdhga11Q91XY8 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Pcdhga11Q91XY8 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Pcdhga11Q91XY8 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC22■■□□□ 1.11
Pcdhga11Q91XY8 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Pcdhga11Q91XY8 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
Pcdhga11Q91XY8 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Pcdhga11Q91XY8 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
Pcdhga11Q91XY8 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC21.99■■□□□ 1.11
Pcdhga11Q91XY8 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Pcdhga11Q91XY8 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Pcdhga11Q91XY8 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
Pcdhga11Q91XY8 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Pcdhga11Q91XY8 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC21.97■■□□□ 1.11
Pcdhga11Q91XY8 Gm5987-201ENSMUST00000196433 1151 ntBASIC21.97■■□□□ 1.11
Pcdhga11Q91XY8 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Pcdhga11Q91XY8 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Pcdhga11Q91XY8 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Pcdhga11Q91XY8 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC21.96■■□□□ 1.11
Pcdhga11Q91XY8 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Pcdhga11Q91XY8 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC21.96■■□□□ 1.11
Pcdhga11Q91XY8 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
Pcdhga11Q91XY8 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Pcdhga11Q91XY8 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Pcdhga11Q91XY8 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Pcdhga11Q91XY8 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Pcdhga11Q91XY8 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Pcdhga11Q91XY8 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Pcdhga11Q91XY8 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pcdhga11Q91XY8 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pcdhga11Q91XY8 Gm37136-201ENSMUST00000194368 194 ntBASIC21.93■■□□□ 1.1
Pcdhga11Q91XY8 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pcdhga11Q91XY8 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdhga11Q91XY8 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdhga11Q91XY8 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdhga11Q91XY8 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdhga11Q91XY8 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdhga11Q91XY8 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdhga11Q91XY8 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdhga11Q91XY8 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdhga11Q91XY8 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pcdhga11Q91XY8 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pcdhga11Q91XY8 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pcdhga11Q91XY8 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Pcdhga11Q91XY8 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.9■■□□□ 1.1
Pcdhga11Q91XY8 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pcdhga11Q91XY8 Gm4419-202ENSMUST00000226239 1431 ntBASIC21.89■■□□□ 1.1
Pcdhga11Q91XY8 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Pcdhga11Q91XY8 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Pcdhga11Q91XY8 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC21.89■■□□□ 1.09
Pcdhga11Q91XY8 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Pcdhga11Q91XY8 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
Pcdhga11Q91XY8 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
Pcdhga11Q91XY8 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdhga11Q91XY8 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdhga11Q91XY8 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdhga11Q91XY8 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
Pcdhga11Q91XY8 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdhga11Q91XY8 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdhga11Q91XY8 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdhga11Q91XY8 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdhga11Q91XY8 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdhga11Q91XY8 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdhga11Q91XY8 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
Pcdhga11Q91XY8 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdhga11Q91XY8 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Pcdhga11Q91XY8 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdhga11Q91XY8 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdhga11Q91XY8 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.85■■□□□ 1.09
Pcdhga11Q91XY8 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdhga11Q91XY8 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdhga11Q91XY8 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdhga11Q91XY8 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Pcdhga11Q91XY8 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
Pcdhga11Q91XY8 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Pcdhga11Q91XY8 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
Pcdhga11Q91XY8 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Pcdhga11Q91XY8 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Pcdhga11Q91XY8 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pcdhga11Q91XY8 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdhga11Q91XY8 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Pcdhga11Q91XY8 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC21.81■■□□□ 1.08
Pcdhga11Q91XY8 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC21.81■■□□□ 1.08
Pcdhga11Q91XY8 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdhga11Q91XY8 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Pcdhga11Q91XY8 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Pcdhga11Q91XY8 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Pcdhga11Q91XY8 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC21.8■■□□□ 1.08
Pcdhga11Q91XY8 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdhga11Q91XY8 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.79■■□□□ 1.08
Pcdhga11Q91XY8 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Pcdhga11Q91XY8 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pcdhga11Q91XY8 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 10.5 ms