Protein–RNA interactions for Protein: Q91XX8

Pcdhgb1, Protocadherin gamma B1, mousemouse

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb1Q91XX8 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Pcdhgb1Q91XX8 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC23.9■■□□□ 1.42
Pcdhgb1Q91XX8 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
Pcdhgb1Q91XX8 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Pcdhgb1Q91XX8 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Pcdhgb1Q91XX8 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Pcdhgb1Q91XX8 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
Pcdhgb1Q91XX8 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Pcdhgb1Q91XX8 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC23.88■■□□□ 1.41
Pcdhgb1Q91XX8 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
Pcdhgb1Q91XX8 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Pcdhgb1Q91XX8 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Pcdhgb1Q91XX8 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Pcdhgb1Q91XX8 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC23.86■■□□□ 1.41
Pcdhgb1Q91XX8 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
Pcdhgb1Q91XX8 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Pcdhgb1Q91XX8 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Pcdhgb1Q91XX8 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Pcdhgb1Q91XX8 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC23.85■■□□□ 1.41
Pcdhgb1Q91XX8 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Pcdhgb1Q91XX8 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
Pcdhgb1Q91XX8 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC23.84■■□□□ 1.41
Pcdhgb1Q91XX8 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Pcdhgb1Q91XX8 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC23.83■■□□□ 1.41
Pcdhgb1Q91XX8 Gm9812-201ENSMUST00000061934 968 ntBASIC23.83■■□□□ 1.41
Pcdhgb1Q91XX8 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Pcdhgb1Q91XX8 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Pcdhgb1Q91XX8 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Pcdhgb1Q91XX8 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Pcdhgb1Q91XX8 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Pcdhgb1Q91XX8 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Pcdhgb1Q91XX8 AC122317.2-201ENSMUST00000218708 1248 ntBASIC23.81■■□□□ 1.4
Pcdhgb1Q91XX8 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
Pcdhgb1Q91XX8 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Pcdhgb1Q91XX8 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Pcdhgb1Q91XX8 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Pcdhgb1Q91XX8 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Pcdhgb1Q91XX8 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC23.8■■□□□ 1.4
Pcdhgb1Q91XX8 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Pcdhgb1Q91XX8 Gm9910-201ENSMUST00000195385 1550 ntBASIC23.79■■□□□ 1.4
Pcdhgb1Q91XX8 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Pcdhgb1Q91XX8 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Pcdhgb1Q91XX8 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Pcdhgb1Q91XX8 Gm27502-201ENSMUST00000183495 199 ntBASIC23.79■■□□□ 1.4
Pcdhgb1Q91XX8 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Pcdhgb1Q91XX8 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Pcdhgb1Q91XX8 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Pcdhgb1Q91XX8 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Pcdhgb1Q91XX8 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
Pcdhgb1Q91XX8 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
Pcdhgb1Q91XX8 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Pcdhgb1Q91XX8 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Pcdhgb1Q91XX8 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Pcdhgb1Q91XX8 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
Pcdhgb1Q91XX8 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC23.78■■□□□ 1.4
Pcdhgb1Q91XX8 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Pcdhgb1Q91XX8 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
Pcdhgb1Q91XX8 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC23.77■■□□□ 1.4
Pcdhgb1Q91XX8 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC23.77■■□□□ 1.4
Pcdhgb1Q91XX8 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Pcdhgb1Q91XX8 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Pcdhgb1Q91XX8 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC23.76■■□□□ 1.39
Pcdhgb1Q91XX8 Gm12366-201ENSMUST00000121722 873 ntBASIC23.76■■□□□ 1.39
Pcdhgb1Q91XX8 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC23.76■■□□□ 1.39
Pcdhgb1Q91XX8 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC23.76■■□□□ 1.39
Pcdhgb1Q91XX8 Gm5786-201ENSMUST00000085368 882 ntBASIC23.76■■□□□ 1.39
Pcdhgb1Q91XX8 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Pcdhgb1Q91XX8 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Pcdhgb1Q91XX8 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Pcdhgb1Q91XX8 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Pcdhgb1Q91XX8 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Pcdhgb1Q91XX8 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC23.74■■□□□ 1.39
Pcdhgb1Q91XX8 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC23.74■■□□□ 1.39
Pcdhgb1Q91XX8 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Pcdhgb1Q91XX8 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Pcdhgb1Q91XX8 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
Pcdhgb1Q91XX8 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Pcdhgb1Q91XX8 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Pcdhgb1Q91XX8 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC23.72■■□□□ 1.39
Pcdhgb1Q91XX8 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
Pcdhgb1Q91XX8 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC23.72■■□□□ 1.39
Pcdhgb1Q91XX8 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Pcdhgb1Q91XX8 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Pcdhgb1Q91XX8 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
Pcdhgb1Q91XX8 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
Pcdhgb1Q91XX8 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC23.71■■□□□ 1.39
Pcdhgb1Q91XX8 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Pcdhgb1Q91XX8 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
Pcdhgb1Q91XX8 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Pcdhgb1Q91XX8 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Pcdhgb1Q91XX8 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Pcdhgb1Q91XX8 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Pcdhgb1Q91XX8 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC23.7■■□□□ 1.38
Pcdhgb1Q91XX8 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Pcdhgb1Q91XX8 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Pcdhgb1Q91XX8 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Pcdhgb1Q91XX8 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Pcdhgb1Q91XX8 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Pcdhgb1Q91XX8 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Pcdhgb1Q91XX8 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms