Protein–RNA interactions for Protein: Q91UZ8

Pcdhb11, MCG141285, mousemouse

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb11Q91UZ8 Gm4419-202ENSMUST00000226239 1431 ntBASIC23.52■■□□□ 1.36
Pcdhb11Q91UZ8 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Pcdhb11Q91UZ8 Gm4799-201ENSMUST00000095396 657 ntBASIC23.52■■□□□ 1.36
Pcdhb11Q91UZ8 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
Pcdhb11Q91UZ8 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
Pcdhb11Q91UZ8 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Pcdhb11Q91UZ8 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Pcdhb11Q91UZ8 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
Pcdhb11Q91UZ8 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC23.5■■□□□ 1.35
Pcdhb11Q91UZ8 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
Pcdhb11Q91UZ8 Gm13889-201ENSMUST00000099689 1386 ntBASIC23.5■■□□□ 1.35
Pcdhb11Q91UZ8 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
Pcdhb11Q91UZ8 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Pcdhb11Q91UZ8 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
Pcdhb11Q91UZ8 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Pcdhb11Q91UZ8 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Pcdhb11Q91UZ8 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC23.48■■□□□ 1.35
Pcdhb11Q91UZ8 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC23.47■■□□□ 1.35
Pcdhb11Q91UZ8 AC167019.3-201ENSMUST00000228225 1266 ntBASIC23.47■■□□□ 1.35
Pcdhb11Q91UZ8 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC23.47■■□□□ 1.35
Pcdhb11Q91UZ8 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC23.46■■□□□ 1.35
Pcdhb11Q91UZ8 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC23.46■■□□□ 1.35
Pcdhb11Q91UZ8 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Pcdhb11Q91UZ8 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
Pcdhb11Q91UZ8 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Pcdhb11Q91UZ8 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC23.46■■□□□ 1.35
Pcdhb11Q91UZ8 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC23.46■■□□□ 1.35
Pcdhb11Q91UZ8 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC23.45■■□□□ 1.35
Pcdhb11Q91UZ8 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Pcdhb11Q91UZ8 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Pcdhb11Q91UZ8 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC23.44■■□□□ 1.34
Pcdhb11Q91UZ8 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Pcdhb11Q91UZ8 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC23.44■■□□□ 1.34
Pcdhb11Q91UZ8 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Pcdhb11Q91UZ8 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Pcdhb11Q91UZ8 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Pcdhb11Q91UZ8 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC23.43■■□□□ 1.34
Pcdhb11Q91UZ8 Mir3960-201ENSMUST00000198213 73 ntBASIC23.43■■□□□ 1.34
Pcdhb11Q91UZ8 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Pcdhb11Q91UZ8 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Pcdhb11Q91UZ8 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Pcdhb11Q91UZ8 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC23.42■■□□□ 1.34
Pcdhb11Q91UZ8 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Pcdhb11Q91UZ8 AC154454.1-201ENSMUST00000225253 216 ntBASIC23.42■■□□□ 1.34
Pcdhb11Q91UZ8 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC23.42■■□□□ 1.34
Pcdhb11Q91UZ8 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Pcdhb11Q91UZ8 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Pcdhb11Q91UZ8 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Pcdhb11Q91UZ8 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Pcdhb11Q91UZ8 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
Pcdhb11Q91UZ8 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC23.4■■□□□ 1.34
Pcdhb11Q91UZ8 Gm45364-201ENSMUST00000210883 159 ntBASIC23.4■■□□□ 1.34
Pcdhb11Q91UZ8 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Pcdhb11Q91UZ8 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Pcdhb11Q91UZ8 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC23.39■■□□□ 1.33
Pcdhb11Q91UZ8 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
Pcdhb11Q91UZ8 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Pcdhb11Q91UZ8 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Pcdhb11Q91UZ8 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
Pcdhb11Q91UZ8 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC23.38■■□□□ 1.33
Pcdhb11Q91UZ8 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
Pcdhb11Q91UZ8 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Pcdhb11Q91UZ8 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Pcdhb11Q91UZ8 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Pcdhb11Q91UZ8 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC23.37■■□□□ 1.33
Pcdhb11Q91UZ8 Gm5987-201ENSMUST00000196433 1151 ntBASIC23.37■■□□□ 1.33
Pcdhb11Q91UZ8 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Pcdhb11Q91UZ8 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Pcdhb11Q91UZ8 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
Pcdhb11Q91UZ8 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Pcdhb11Q91UZ8 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
Pcdhb11Q91UZ8 Gm12818-201ENSMUST00000117562 1349 ntBASIC23.35■■□□□ 1.33
Pcdhb11Q91UZ8 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Pcdhb11Q91UZ8 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC23.35■■□□□ 1.33
Pcdhb11Q91UZ8 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Pcdhb11Q91UZ8 Gm9812-201ENSMUST00000061934 968 ntBASIC23.35■■□□□ 1.33
Pcdhb11Q91UZ8 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Pcdhb11Q91UZ8 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Pcdhb11Q91UZ8 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
Pcdhb11Q91UZ8 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC23.34■■□□□ 1.33
Pcdhb11Q91UZ8 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Pcdhb11Q91UZ8 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
Pcdhb11Q91UZ8 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Pcdhb11Q91UZ8 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
Pcdhb11Q91UZ8 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC23.32■■□□□ 1.32
Pcdhb11Q91UZ8 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
Pcdhb11Q91UZ8 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC23.31■■□□□ 1.32
Pcdhb11Q91UZ8 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Pcdhb11Q91UZ8 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Pcdhb11Q91UZ8 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Pcdhb11Q91UZ8 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
Pcdhb11Q91UZ8 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Pcdhb11Q91UZ8 AC122317.2-201ENSMUST00000218708 1248 ntBASIC23.3■■□□□ 1.32
Pcdhb11Q91UZ8 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC23.3■■□□□ 1.32
Pcdhb11Q91UZ8 Gm6311-201ENSMUST00000073790 878 ntBASIC23.3■■□□□ 1.32
Pcdhb11Q91UZ8 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Pcdhb11Q91UZ8 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Pcdhb11Q91UZ8 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
Pcdhb11Q91UZ8 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Pcdhb11Q91UZ8 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC23.29■■□□□ 1.32
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms