Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Trim60Q8VI40 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Trim60Q8VI40 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Trim60Q8VI40 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Trim60Q8VI40 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Trim60Q8VI40 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
Trim60Q8VI40 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Trim60Q8VI40 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Trim60Q8VI40 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Trim60Q8VI40 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Trim60Q8VI40 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Trim60Q8VI40 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Trim60Q8VI40 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Trim60Q8VI40 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Trim60Q8VI40 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Trim60Q8VI40 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Trim60Q8VI40 Nkain2-201ENSMUST00000092602 558 ntBASIC23.65■■□□□ 1.38
Trim60Q8VI40 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.38
Trim60Q8VI40 Gm42699-201ENSMUST00000198104 1657 ntBASIC23.64■■□□□ 1.38
Trim60Q8VI40 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.37
Trim60Q8VI40 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
Trim60Q8VI40 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
Trim60Q8VI40 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC23.64■■□□□ 1.37
Trim60Q8VI40 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Trim60Q8VI40 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC23.64■■□□□ 1.37
Trim60Q8VI40 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Trim60Q8VI40 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC23.63■■□□□ 1.37
Trim60Q8VI40 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Trim60Q8VI40 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
Trim60Q8VI40 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC23.62■■□□□ 1.37
Trim60Q8VI40 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Trim60Q8VI40 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Trim60Q8VI40 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Trim60Q8VI40 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Trim60Q8VI40 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Trim60Q8VI40 Gm4419-202ENSMUST00000226239 1431 ntBASIC23.61■■□□□ 1.37
Trim60Q8VI40 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC23.61■■□□□ 1.37
Trim60Q8VI40 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Trim60Q8VI40 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
Trim60Q8VI40 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
Trim60Q8VI40 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Trim60Q8VI40 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Trim60Q8VI40 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Trim60Q8VI40 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC23.59■■□□□ 1.37
Trim60Q8VI40 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
Trim60Q8VI40 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Trim60Q8VI40 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
Trim60Q8VI40 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.37
Trim60Q8VI40 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC23.58■■□□□ 1.37
Trim60Q8VI40 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.37
Trim60Q8VI40 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Trim60Q8VI40 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Trim60Q8VI40 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Trim60Q8VI40 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Trim60Q8VI40 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Trim60Q8VI40 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Trim60Q8VI40 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Trim60Q8VI40 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Trim60Q8VI40 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Trim60Q8VI40 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
Trim60Q8VI40 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Trim60Q8VI40 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC23.55■■□□□ 1.36
Trim60Q8VI40 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Trim60Q8VI40 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Trim60Q8VI40 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
Trim60Q8VI40 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
Trim60Q8VI40 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Trim60Q8VI40 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Trim60Q8VI40 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
Trim60Q8VI40 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC23.54■■□□□ 1.36
Trim60Q8VI40 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Trim60Q8VI40 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Trim60Q8VI40 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Trim60Q8VI40 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
Trim60Q8VI40 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC23.53■■□□□ 1.36
Trim60Q8VI40 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC23.52■■□□□ 1.36
Trim60Q8VI40 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Trim60Q8VI40 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Trim60Q8VI40 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Trim60Q8VI40 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Trim60Q8VI40 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC23.51■■□□□ 1.35
Trim60Q8VI40 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Trim60Q8VI40 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC23.51■■□□□ 1.35
Trim60Q8VI40 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Trim60Q8VI40 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Trim60Q8VI40 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC23.49■■□□□ 1.35
Trim60Q8VI40 Gm37136-201ENSMUST00000194368 194 ntBASIC23.49■■□□□ 1.35
Trim60Q8VI40 Gm42809-201ENSMUST00000198429 1138 ntBASIC23.49■■□□□ 1.35
Trim60Q8VI40 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Trim60Q8VI40 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Trim60Q8VI40 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Trim60Q8VI40 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC23.48■■□□□ 1.35
Trim60Q8VI40 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
Trim60Q8VI40 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Trim60Q8VI40 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Trim60Q8VI40 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
Trim60Q8VI40 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC23.47■■□□□ 1.35
Trim60Q8VI40 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC23.47■■□□□ 1.35
Trim60Q8VI40 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
Trim60Q8VI40 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Retrieved 100 of 76,532 protein–RNA pairs in 83.8 ms