Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Rpa1Q8VEE4 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Rpa1Q8VEE4 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC23.06■■□□□ 1.28
Rpa1Q8VEE4 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Rpa1Q8VEE4 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
Rpa1Q8VEE4 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
Rpa1Q8VEE4 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC23.06■■□□□ 1.28
Rpa1Q8VEE4 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Rpa1Q8VEE4 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Rpa1Q8VEE4 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Rpa1Q8VEE4 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
Rpa1Q8VEE4 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
Rpa1Q8VEE4 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
Rpa1Q8VEE4 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Rpa1Q8VEE4 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC23.04■■□□□ 1.28
Rpa1Q8VEE4 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Rpa1Q8VEE4 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
Rpa1Q8VEE4 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Rpa1Q8VEE4 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Rpa1Q8VEE4 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Rpa1Q8VEE4 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Rpa1Q8VEE4 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Rpa1Q8VEE4 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Rpa1Q8VEE4 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC23.02■■□□□ 1.28
Rpa1Q8VEE4 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Rpa1Q8VEE4 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Rpa1Q8VEE4 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Rpa1Q8VEE4 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC23.02■■□□□ 1.28
Rpa1Q8VEE4 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Rpa1Q8VEE4 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Rpa1Q8VEE4 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Rpa1Q8VEE4 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
Rpa1Q8VEE4 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
Rpa1Q8VEE4 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.27
Rpa1Q8VEE4 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC23.01■■□□□ 1.27
Rpa1Q8VEE4 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Rpa1Q8VEE4 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC23.01■■□□□ 1.27
Rpa1Q8VEE4 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC23.01■■□□□ 1.27
Rpa1Q8VEE4 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Rpa1Q8VEE4 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Rpa1Q8VEE4 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Rpa1Q8VEE4 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
Rpa1Q8VEE4 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
Rpa1Q8VEE4 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
Rpa1Q8VEE4 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
Rpa1Q8VEE4 Particl-201ENSMUST00000205370 1560 ntBASIC22.99■■□□□ 1.27
Rpa1Q8VEE4 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Rpa1Q8VEE4 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Rpa1Q8VEE4 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Rpa1Q8VEE4 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Rpa1Q8VEE4 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC22.98■■□□□ 1.27
Rpa1Q8VEE4 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Rpa1Q8VEE4 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
Rpa1Q8VEE4 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Rpa1Q8VEE4 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Rpa1Q8VEE4 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Rpa1Q8VEE4 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Rpa1Q8VEE4 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Rpa1Q8VEE4 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Rpa1Q8VEE4 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Rpa1Q8VEE4 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Rpa1Q8VEE4 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Rpa1Q8VEE4 Gm43863-201ENSMUST00000203822 1192 ntBASIC22.95■■□□□ 1.26
Rpa1Q8VEE4 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Rpa1Q8VEE4 Gm42699-201ENSMUST00000198104 1657 ntBASIC22.94■■□□□ 1.26
Rpa1Q8VEE4 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
Rpa1Q8VEE4 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
Rpa1Q8VEE4 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Rpa1Q8VEE4 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Rpa1Q8VEE4 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Rpa1Q8VEE4 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC22.93■■□□□ 1.26
Rpa1Q8VEE4 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
Rpa1Q8VEE4 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Rpa1Q8VEE4 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
Rpa1Q8VEE4 Gm6277-202ENSMUST00000224036 2779 ntBASIC22.92■■□□□ 1.26
Rpa1Q8VEE4 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC22.92■■□□□ 1.26
Rpa1Q8VEE4 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Rpa1Q8VEE4 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC22.92■■□□□ 1.26
Rpa1Q8VEE4 Zfp131-205ENSMUST00000223812 663 ntBASIC22.91■■□□□ 1.26
Rpa1Q8VEE4 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Rpa1Q8VEE4 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC22.9■■□□□ 1.26
Rpa1Q8VEE4 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Rpa1Q8VEE4 AC157572.2-201ENSMUST00000226970 908 ntBASIC22.9■■□□□ 1.26
Rpa1Q8VEE4 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Rpa1Q8VEE4 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Rpa1Q8VEE4 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.25
Rpa1Q8VEE4 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Rpa1Q8VEE4 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.25
Rpa1Q8VEE4 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Rpa1Q8VEE4 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
Rpa1Q8VEE4 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
Rpa1Q8VEE4 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Rpa1Q8VEE4 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
Rpa1Q8VEE4 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC22.87■■□□□ 1.25
Rpa1Q8VEE4 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
Rpa1Q8VEE4 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Rpa1Q8VEE4 Gm30023-201ENSMUST00000197970 889 ntBASIC22.86■■□□□ 1.25
Rpa1Q8VEE4 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC22.86■■□□□ 1.25
Rpa1Q8VEE4 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC22.86■■□□□ 1.25
Rpa1Q8VEE4 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms