Protein–RNA interactions for Protein: Q8R4I4

Gtf2a1l, TFIIA-alpha and beta-like factor, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2a1lQ8R4I4 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Gtf2a1lQ8R4I4 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Gtf2a1lQ8R4I4 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Gtf2a1lQ8R4I4 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Gtf2a1lQ8R4I4 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Gtf2a1lQ8R4I4 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Gtf2a1lQ8R4I4 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Gtf2a1lQ8R4I4 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
Gtf2a1lQ8R4I4 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC22.32■■□□□ 1.16
Gtf2a1lQ8R4I4 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Gtf2a1lQ8R4I4 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Gtf2a1lQ8R4I4 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Gtf2a1lQ8R4I4 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Gtf2a1lQ8R4I4 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Gtf2a1lQ8R4I4 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Gtf2a1lQ8R4I4 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC22.3■■□□□ 1.16
Gtf2a1lQ8R4I4 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Gtf2a1lQ8R4I4 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Gtf2a1lQ8R4I4 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Gtf2a1lQ8R4I4 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC22.3■■□□□ 1.16
Gtf2a1lQ8R4I4 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
Gtf2a1lQ8R4I4 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Gtf2a1lQ8R4I4 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Gtf2a1lQ8R4I4 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
Gtf2a1lQ8R4I4 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC22.27■■□□□ 1.16
Gtf2a1lQ8R4I4 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Gtf2a1lQ8R4I4 AC131739.1-201ENSMUST00000221692 1245 ntBASIC22.27■■□□□ 1.16
Gtf2a1lQ8R4I4 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
Gtf2a1lQ8R4I4 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Gtf2a1lQ8R4I4 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Gtf2a1lQ8R4I4 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Gtf2a1lQ8R4I4 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Gtf2a1lQ8R4I4 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Gtf2a1lQ8R4I4 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Gtf2a1lQ8R4I4 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Gtf2a1lQ8R4I4 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Gtf2a1lQ8R4I4 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
Gtf2a1lQ8R4I4 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Gtf2a1lQ8R4I4 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
Gtf2a1lQ8R4I4 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
Gtf2a1lQ8R4I4 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC22.22■■□□□ 1.15
Gtf2a1lQ8R4I4 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Gtf2a1lQ8R4I4 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Gtf2a1lQ8R4I4 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Gtf2a1lQ8R4I4 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Gtf2a1lQ8R4I4 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC22.2■■□□□ 1.14
Gtf2a1lQ8R4I4 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC22.2■■□□□ 1.14
Gtf2a1lQ8R4I4 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Gtf2a1lQ8R4I4 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
Gtf2a1lQ8R4I4 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
Gtf2a1lQ8R4I4 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Gtf2a1lQ8R4I4 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Gtf2a1lQ8R4I4 Gm14121-201ENSMUST00000121441 1380 ntBASIC22.19■■□□□ 1.14
Gtf2a1lQ8R4I4 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Gtf2a1lQ8R4I4 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Gtf2a1lQ8R4I4 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC22.18■■□□□ 1.14
Gtf2a1lQ8R4I4 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
Gtf2a1lQ8R4I4 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC22.18■■□□□ 1.14
Gtf2a1lQ8R4I4 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC22.18■■□□□ 1.14
Gtf2a1lQ8R4I4 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Gtf2a1lQ8R4I4 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Gtf2a1lQ8R4I4 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Gtf2a1lQ8R4I4 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC22.17■■□□□ 1.14
Gtf2a1lQ8R4I4 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Gtf2a1lQ8R4I4 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Gtf2a1lQ8R4I4 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Gtf2a1lQ8R4I4 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Gtf2a1lQ8R4I4 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Gtf2a1lQ8R4I4 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Gtf2a1lQ8R4I4 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
Gtf2a1lQ8R4I4 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
Gtf2a1lQ8R4I4 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Gtf2a1lQ8R4I4 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Gtf2a1lQ8R4I4 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
Gtf2a1lQ8R4I4 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Gtf2a1lQ8R4I4 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Gtf2a1lQ8R4I4 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Gtf2a1lQ8R4I4 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
Gtf2a1lQ8R4I4 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC22.14■■□□□ 1.13
Gtf2a1lQ8R4I4 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Gtf2a1lQ8R4I4 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC22.14■■□□□ 1.13
Gtf2a1lQ8R4I4 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Gtf2a1lQ8R4I4 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Gtf2a1lQ8R4I4 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
Gtf2a1lQ8R4I4 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Gtf2a1lQ8R4I4 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC22.12■■□□□ 1.13
Gtf2a1lQ8R4I4 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC22.12■■□□□ 1.13
Gtf2a1lQ8R4I4 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC22.12■■□□□ 1.13
Gtf2a1lQ8R4I4 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
Gtf2a1lQ8R4I4 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Gtf2a1lQ8R4I4 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
Gtf2a1lQ8R4I4 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Gtf2a1lQ8R4I4 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
Gtf2a1lQ8R4I4 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Gtf2a1lQ8R4I4 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Gtf2a1lQ8R4I4 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
Gtf2a1lQ8R4I4 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Gtf2a1lQ8R4I4 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Gtf2a1lQ8R4I4 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Gtf2a1lQ8R4I4 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms