Protein–RNA interactions for Protein: Q8R317

Ubqln1, Ubiquilin-1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln1Q8R317 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Ubqln1Q8R317 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ubqln1Q8R317 Gm11599-201ENSMUST00000118720 878 ntBASIC21.67■■□□□ 1.06
Ubqln1Q8R317 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ubqln1Q8R317 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ubqln1Q8R317 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ubqln1Q8R317 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC21.66■■□□□ 1.06
Ubqln1Q8R317 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Ubqln1Q8R317 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ubqln1Q8R317 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ubqln1Q8R317 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ubqln1Q8R317 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ubqln1Q8R317 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21.65■■□□□ 1.06
Ubqln1Q8R317 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Ubqln1Q8R317 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC21.65■■□□□ 1.06
Ubqln1Q8R317 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ubqln1Q8R317 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ubqln1Q8R317 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ubqln1Q8R317 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ubqln1Q8R317 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ubqln1Q8R317 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ubqln1Q8R317 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ubqln1Q8R317 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ubqln1Q8R317 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ubqln1Q8R317 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ubqln1Q8R317 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ubqln1Q8R317 Gm4419-202ENSMUST00000226239 1431 ntBASIC21.62■■□□□ 1.05
Ubqln1Q8R317 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ubqln1Q8R317 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ubqln1Q8R317 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC21.59■■□□□ 1.05
Ubqln1Q8R317 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ubqln1Q8R317 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ubqln1Q8R317 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ubqln1Q8R317 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ubqln1Q8R317 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Ubqln1Q8R317 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ubqln1Q8R317 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Ubqln1Q8R317 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC21.57■■□□□ 1.04
Ubqln1Q8R317 Gm4799-201ENSMUST00000095396 657 ntBASIC21.57■■□□□ 1.04
Ubqln1Q8R317 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Ubqln1Q8R317 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Ubqln1Q8R317 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Ubqln1Q8R317 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.55■■□□□ 1.04
Ubqln1Q8R317 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Ubqln1Q8R317 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ubqln1Q8R317 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Ubqln1Q8R317 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Ubqln1Q8R317 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ubqln1Q8R317 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ubqln1Q8R317 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ubqln1Q8R317 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ubqln1Q8R317 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ubqln1Q8R317 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.53■■□□□ 1.04
Ubqln1Q8R317 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ubqln1Q8R317 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ubqln1Q8R317 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ubqln1Q8R317 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Ubqln1Q8R317 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC21.52■■□□□ 1.04
Ubqln1Q8R317 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.52■■□□□ 1.04
Ubqln1Q8R317 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ubqln1Q8R317 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ubqln1Q8R317 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ubqln1Q8R317 Gm13889-201ENSMUST00000099689 1386 ntBASIC21.51■■□□□ 1.03
Ubqln1Q8R317 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Ubqln1Q8R317 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ubqln1Q8R317 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.51■■□□□ 1.03
Ubqln1Q8R317 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Ubqln1Q8R317 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ubqln1Q8R317 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ubqln1Q8R317 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Ubqln1Q8R317 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ubqln1Q8R317 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Ubqln1Q8R317 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC21.5■■□□□ 1.03
Ubqln1Q8R317 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ubqln1Q8R317 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Ubqln1Q8R317 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Ubqln1Q8R317 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ubqln1Q8R317 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ubqln1Q8R317 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ubqln1Q8R317 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ubqln1Q8R317 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Ubqln1Q8R317 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Ubqln1Q8R317 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ubqln1Q8R317 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ubqln1Q8R317 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Ubqln1Q8R317 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Ubqln1Q8R317 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
Ubqln1Q8R317 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ubqln1Q8R317 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ubqln1Q8R317 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Ubqln1Q8R317 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ubqln1Q8R317 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC21.47■■□□□ 1.03
Ubqln1Q8R317 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC21.47■■□□□ 1.03
Ubqln1Q8R317 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ubqln1Q8R317 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ubqln1Q8R317 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Ubqln1Q8R317 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ubqln1Q8R317 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.46■■□□□ 1.03
Ubqln1Q8R317 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Ubqln1Q8R317 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms