Protein–RNA interactions for Protein: Q8K377

Lrrtm1, Leucine-rich repeat transmembrane neuronal protein 1, mousemouse

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrtm1Q8K377 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
Lrrtm1Q8K377 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Lrrtm1Q8K377 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Lrrtm1Q8K377 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Lrrtm1Q8K377 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Lrrtm1Q8K377 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lrrtm1Q8K377 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC19.59■□□□□ 0.73
Lrrtm1Q8K377 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lrrtm1Q8K377 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lrrtm1Q8K377 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.59■□□□□ 0.73
Lrrtm1Q8K377 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC19.58■□□□□ 0.73
Lrrtm1Q8K377 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Lrrtm1Q8K377 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Lrrtm1Q8K377 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Lrrtm1Q8K377 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC19.58■□□□□ 0.73
Lrrtm1Q8K377 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC19.58■□□□□ 0.72
Lrrtm1Q8K377 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Lrrtm1Q8K377 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Lrrtm1Q8K377 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Lrrtm1Q8K377 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Lrrtm1Q8K377 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC19.57■□□□□ 0.72
Lrrtm1Q8K377 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Lrrtm1Q8K377 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Lrrtm1Q8K377 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Lrrtm1Q8K377 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Lrrtm1Q8K377 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Lrrtm1Q8K377 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lrrtm1Q8K377 Zfp131-205ENSMUST00000223812 663 ntBASIC19.56■□□□□ 0.72
Lrrtm1Q8K377 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lrrtm1Q8K377 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lrrtm1Q8K377 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.55■□□□□ 0.72
Lrrtm1Q8K377 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Lrrtm1Q8K377 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Lrrtm1Q8K377 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.55■□□□□ 0.72
Lrrtm1Q8K377 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Lrrtm1Q8K377 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC19.54■□□□□ 0.72
Lrrtm1Q8K377 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Lrrtm1Q8K377 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.53■□□□□ 0.72
Lrrtm1Q8K377 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.53■□□□□ 0.72
Lrrtm1Q8K377 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Lrrtm1Q8K377 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.52■□□□□ 0.72
Lrrtm1Q8K377 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Lrrtm1Q8K377 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Lrrtm1Q8K377 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Lrrtm1Q8K377 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.51■□□□□ 0.71
Lrrtm1Q8K377 Gm30023-201ENSMUST00000197970 889 ntBASIC19.51■□□□□ 0.71
Lrrtm1Q8K377 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lrrtm1Q8K377 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Lrrtm1Q8K377 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.5■□□□□ 0.71
Lrrtm1Q8K377 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC19.5■□□□□ 0.71
Lrrtm1Q8K377 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lrrtm1Q8K377 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lrrtm1Q8K377 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lrrtm1Q8K377 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
Lrrtm1Q8K377 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC19.49■□□□□ 0.71
Lrrtm1Q8K377 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lrrtm1Q8K377 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.49■□□□□ 0.71
Lrrtm1Q8K377 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Lrrtm1Q8K377 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.48■□□□□ 0.71
Lrrtm1Q8K377 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
Lrrtm1Q8K377 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC19.48■□□□□ 0.71
Lrrtm1Q8K377 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Lrrtm1Q8K377 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Lrrtm1Q8K377 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lrrtm1Q8K377 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lrrtm1Q8K377 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Lrrtm1Q8K377 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lrrtm1Q8K377 Gm9397-201ENSMUST00000200125 605 ntBASIC19.47■□□□□ 0.71
Lrrtm1Q8K377 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lrrtm1Q8K377 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lrrtm1Q8K377 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lrrtm1Q8K377 Gm24970-201ENSMUST00000175582 82 ntBASIC19.46■□□□□ 0.71
Lrrtm1Q8K377 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lrrtm1Q8K377 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lrrtm1Q8K377 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lrrtm1Q8K377 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Lrrtm1Q8K377 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lrrtm1Q8K377 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lrrtm1Q8K377 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lrrtm1Q8K377 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lrrtm1Q8K377 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Lrrtm1Q8K377 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Lrrtm1Q8K377 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lrrtm1Q8K377 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Lrrtm1Q8K377 Particl-201ENSMUST00000205370 1560 ntBASIC19.44■□□□□ 0.7
Lrrtm1Q8K377 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Lrrtm1Q8K377 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lrrtm1Q8K377 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Lrrtm1Q8K377 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Lrrtm1Q8K377 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Lrrtm1Q8K377 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Lrrtm1Q8K377 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lrrtm1Q8K377 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lrrtm1Q8K377 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Lrrtm1Q8K377 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC19.42■□□□□ 0.7
Lrrtm1Q8K377 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Lrrtm1Q8K377 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lrrtm1Q8K377 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Lrrtm1Q8K377 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Lrrtm1Q8K377 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms