Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC14.36□□□□□ -0.11
Cystm1Q8K353 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cystm1Q8K353 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cystm1Q8K353 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC14.35□□□□□ -0.11
Cystm1Q8K353 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cystm1Q8K353 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cystm1Q8K353 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cystm1Q8K353 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cystm1Q8K353 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cystm1Q8K353 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cystm1Q8K353 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cystm1Q8K353 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cystm1Q8K353 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cystm1Q8K353 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Cystm1Q8K353 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Cystm1Q8K353 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cystm1Q8K353 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cystm1Q8K353 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cystm1Q8K353 Gm24970-201ENSMUST00000175582 82 ntBASIC14.33□□□□□ -0.12
Cystm1Q8K353 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Cystm1Q8K353 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Cystm1Q8K353 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC14.32□□□□□ -0.12
Cystm1Q8K353 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cystm1Q8K353 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cystm1Q8K353 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cystm1Q8K353 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC14.31□□□□□ -0.12
Cystm1Q8K353 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cystm1Q8K353 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC14.31□□□□□ -0.12
Cystm1Q8K353 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cystm1Q8K353 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
Cystm1Q8K353 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cystm1Q8K353 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cystm1Q8K353 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC14.3□□□□□ -0.12
Cystm1Q8K353 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Cystm1Q8K353 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC14.3□□□□□ -0.12
Cystm1Q8K353 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cystm1Q8K353 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cystm1Q8K353 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cystm1Q8K353 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cystm1Q8K353 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Cystm1Q8K353 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cystm1Q8K353 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Cystm1Q8K353 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cystm1Q8K353 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cystm1Q8K353 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cystm1Q8K353 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cystm1Q8K353 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC14.28□□□□□ -0.12
Cystm1Q8K353 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cystm1Q8K353 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cystm1Q8K353 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cystm1Q8K353 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC14.28□□□□□ -0.12
Cystm1Q8K353 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Cystm1Q8K353 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cystm1Q8K353 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cystm1Q8K353 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cystm1Q8K353 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Cystm1Q8K353 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cystm1Q8K353 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Cystm1Q8K353 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Cystm1Q8K353 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cystm1Q8K353 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cystm1Q8K353 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cystm1Q8K353 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Cystm1Q8K353 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cystm1Q8K353 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cystm1Q8K353 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cystm1Q8K353 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cystm1Q8K353 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cystm1Q8K353 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cystm1Q8K353 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cystm1Q8K353 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cystm1Q8K353 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cystm1Q8K353 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cystm1Q8K353 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cystm1Q8K353 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cystm1Q8K353 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Cystm1Q8K353 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cystm1Q8K353 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC14.23□□□□□ -0.13
Cystm1Q8K353 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC14.23□□□□□ -0.13
Cystm1Q8K353 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cystm1Q8K353 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Cystm1Q8K353 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC14.23□□□□□ -0.13
Cystm1Q8K353 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cystm1Q8K353 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Cystm1Q8K353 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cystm1Q8K353 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cystm1Q8K353 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cystm1Q8K353 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cystm1Q8K353 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC14.22□□□□□ -0.13
Cystm1Q8K353 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
Cystm1Q8K353 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cystm1Q8K353 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cystm1Q8K353 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cystm1Q8K353 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cystm1Q8K353 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cystm1Q8K353 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Cystm1Q8K353 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cystm1Q8K353 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cystm1Q8K353 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cystm1Q8K353 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms