Protein–RNA interactions for Protein: Q8K2Z4

Ncapd2, Condensin complex subunit 1, mousemouse

Predictions only

Length 1,392 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ncapd2Q8K2Z4 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
Ncapd2Q8K2Z4 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC31.18■■■□□ 2.58
Ncapd2Q8K2Z4 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
Ncapd2Q8K2Z4 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC31.18■■■□□ 2.58
Ncapd2Q8K2Z4 Gm43445-201ENSMUST00000198564 2091 ntBASIC31.18■■■□□ 2.58
Ncapd2Q8K2Z4 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
Ncapd2Q8K2Z4 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Ncapd2Q8K2Z4 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
Ncapd2Q8K2Z4 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
Ncapd2Q8K2Z4 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Ncapd2Q8K2Z4 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Ncapd2Q8K2Z4 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Ncapd2Q8K2Z4 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC31.16■■■□□ 2.58
Ncapd2Q8K2Z4 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC31.16■■■□□ 2.58
Ncapd2Q8K2Z4 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Ncapd2Q8K2Z4 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Ncapd2Q8K2Z4 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Ncapd2Q8K2Z4 Gm14121-201ENSMUST00000121441 1380 ntBASIC31.15■■■□□ 2.58
Ncapd2Q8K2Z4 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Ncapd2Q8K2Z4 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC31.15■■■□□ 2.58
Ncapd2Q8K2Z4 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
Ncapd2Q8K2Z4 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
Ncapd2Q8K2Z4 Gm6206-201ENSMUST00000133472 2199 ntBASIC31.15■■■□□ 2.58
Ncapd2Q8K2Z4 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
Ncapd2Q8K2Z4 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC31.14■■■□□ 2.58
Ncapd2Q8K2Z4 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Ncapd2Q8K2Z4 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
Ncapd2Q8K2Z4 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC31.13■■■□□ 2.57
Ncapd2Q8K2Z4 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Ncapd2Q8K2Z4 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Ncapd2Q8K2Z4 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Ncapd2Q8K2Z4 AC153911.1-201ENSMUST00000220378 758 ntBASIC31.1■■■□□ 2.57
Ncapd2Q8K2Z4 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC31.1■■■□□ 2.57
Ncapd2Q8K2Z4 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC31.09■■■□□ 2.57
Ncapd2Q8K2Z4 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC31.09■■■□□ 2.57
Ncapd2Q8K2Z4 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Ncapd2Q8K2Z4 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Ncapd2Q8K2Z4 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC31.08■■■□□ 2.57
Ncapd2Q8K2Z4 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC31.07■■■□□ 2.57
Ncapd2Q8K2Z4 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
Ncapd2Q8K2Z4 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
Ncapd2Q8K2Z4 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC31.07■■■□□ 2.56
Ncapd2Q8K2Z4 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Ncapd2Q8K2Z4 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Ncapd2Q8K2Z4 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Ncapd2Q8K2Z4 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Ncapd2Q8K2Z4 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
Ncapd2Q8K2Z4 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC31.02■■■□□ 2.56
Ncapd2Q8K2Z4 Terc-201ENSMUST00000082862 423 ntBASIC31.02■■■□□ 2.56
Ncapd2Q8K2Z4 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
Ncapd2Q8K2Z4 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC31.02■■■□□ 2.56
Ncapd2Q8K2Z4 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC31.01■■■□□ 2.55
Ncapd2Q8K2Z4 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
Ncapd2Q8K2Z4 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC30.99■■■□□ 2.55
Ncapd2Q8K2Z4 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
Ncapd2Q8K2Z4 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Ncapd2Q8K2Z4 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
Ncapd2Q8K2Z4 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
Ncapd2Q8K2Z4 Gm15546-201ENSMUST00000122095 826 ntBASIC30.96■■■□□ 2.55
Ncapd2Q8K2Z4 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Ncapd2Q8K2Z4 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
Ncapd2Q8K2Z4 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
Ncapd2Q8K2Z4 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
Ncapd2Q8K2Z4 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC30.95■■■□□ 2.54
Ncapd2Q8K2Z4 Gm37847-201ENSMUST00000192163 1497 ntBASIC30.94■■■□□ 2.54
Ncapd2Q8K2Z4 Gm31748-201ENSMUST00000194938 1497 ntBASIC30.94■■■□□ 2.54
Ncapd2Q8K2Z4 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC30.93■■■□□ 2.54
Ncapd2Q8K2Z4 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC30.93■■■□□ 2.54
Ncapd2Q8K2Z4 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC30.93■■■□□ 2.54
Ncapd2Q8K2Z4 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC30.92■■■□□ 2.54
Ncapd2Q8K2Z4 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC30.92■■■□□ 2.54
Ncapd2Q8K2Z4 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
Ncapd2Q8K2Z4 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC30.92■■■□□ 2.54
Ncapd2Q8K2Z4 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Ncapd2Q8K2Z4 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Ncapd2Q8K2Z4 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC30.9■■■□□ 2.54
Ncapd2Q8K2Z4 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Ncapd2Q8K2Z4 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC30.9■■■□□ 2.54
Ncapd2Q8K2Z4 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC30.89■■■□□ 2.54
Ncapd2Q8K2Z4 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
Ncapd2Q8K2Z4 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
Ncapd2Q8K2Z4 Gm5522-201ENSMUST00000189483 1242 ntBASIC30.89■■■□□ 2.54
Ncapd2Q8K2Z4 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
Ncapd2Q8K2Z4 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC30.88■■■□□ 2.53
Ncapd2Q8K2Z4 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC30.88■■■□□ 2.53
Ncapd2Q8K2Z4 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
Ncapd2Q8K2Z4 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC30.87■■■□□ 2.53
Ncapd2Q8K2Z4 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC30.87■■■□□ 2.53
Ncapd2Q8K2Z4 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC30.87■■■□□ 2.53
Ncapd2Q8K2Z4 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Ncapd2Q8K2Z4 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC30.86■■■□□ 2.53
Ncapd2Q8K2Z4 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC30.86■■■□□ 2.53
Ncapd2Q8K2Z4 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Ncapd2Q8K2Z4 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Ncapd2Q8K2Z4 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC30.84■■■□□ 2.53
Ncapd2Q8K2Z4 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
Ncapd2Q8K2Z4 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC30.83■■■□□ 2.53
Ncapd2Q8K2Z4 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC30.83■■■□□ 2.53
Ncapd2Q8K2Z4 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Ncapd2Q8K2Z4 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms