Protein–RNA interactions for Protein: Q8CIG0

Depdc1a, DEP domain-containing protein 1A, mousemouse

Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1aQ8CIG0 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Depdc1aQ8CIG0 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Depdc1aQ8CIG0 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Depdc1aQ8CIG0 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Depdc1aQ8CIG0 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Depdc1aQ8CIG0 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
Depdc1aQ8CIG0 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Depdc1aQ8CIG0 Gm9910-201ENSMUST00000195385 1550 ntBASIC26.28■■□□□ 1.8
Depdc1aQ8CIG0 Gm4419-202ENSMUST00000226239 1431 ntBASIC26.27■■□□□ 1.8
Depdc1aQ8CIG0 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Depdc1aQ8CIG0 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Depdc1aQ8CIG0 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC26.26■■□□□ 1.79
Depdc1aQ8CIG0 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
Depdc1aQ8CIG0 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Depdc1aQ8CIG0 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC26.25■■□□□ 1.79
Depdc1aQ8CIG0 AC153911.1-201ENSMUST00000220378 758 ntBASIC26.25■■□□□ 1.79
Depdc1aQ8CIG0 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Depdc1aQ8CIG0 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
Depdc1aQ8CIG0 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Depdc1aQ8CIG0 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Depdc1aQ8CIG0 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC26.24■■□□□ 1.79
Depdc1aQ8CIG0 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
Depdc1aQ8CIG0 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Depdc1aQ8CIG0 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
Depdc1aQ8CIG0 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Depdc1aQ8CIG0 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
Depdc1aQ8CIG0 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC26.22■■□□□ 1.79
Depdc1aQ8CIG0 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
Depdc1aQ8CIG0 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Depdc1aQ8CIG0 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Depdc1aQ8CIG0 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Depdc1aQ8CIG0 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Depdc1aQ8CIG0 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Depdc1aQ8CIG0 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
Depdc1aQ8CIG0 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
Depdc1aQ8CIG0 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Depdc1aQ8CIG0 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
Depdc1aQ8CIG0 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Depdc1aQ8CIG0 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
Depdc1aQ8CIG0 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC26.19■■□□□ 1.78
Depdc1aQ8CIG0 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC26.19■■□□□ 1.78
Depdc1aQ8CIG0 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC26.19■■□□□ 1.78
Depdc1aQ8CIG0 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC26.19■■□□□ 1.78
Depdc1aQ8CIG0 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC26.18■■□□□ 1.78
Depdc1aQ8CIG0 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Depdc1aQ8CIG0 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC26.18■■□□□ 1.78
Depdc1aQ8CIG0 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC26.18■■□□□ 1.78
Depdc1aQ8CIG0 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Depdc1aQ8CIG0 Terc-201ENSMUST00000082862 423 ntBASIC26.18■■□□□ 1.78
Depdc1aQ8CIG0 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Depdc1aQ8CIG0 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
Depdc1aQ8CIG0 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Depdc1aQ8CIG0 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC26.17■■□□□ 1.78
Depdc1aQ8CIG0 Gm12366-201ENSMUST00000121722 873 ntBASIC26.17■■□□□ 1.78
Depdc1aQ8CIG0 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC26.17■■□□□ 1.78
Depdc1aQ8CIG0 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC26.17■■□□□ 1.78
Depdc1aQ8CIG0 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Depdc1aQ8CIG0 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Depdc1aQ8CIG0 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC26.17■■□□□ 1.78
Depdc1aQ8CIG0 Gm5786-201ENSMUST00000085368 882 ntBASIC26.17■■□□□ 1.78
Depdc1aQ8CIG0 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Depdc1aQ8CIG0 AC122428.3-201ENSMUST00000215551 2290 ntBASIC26.16■■□□□ 1.78
Depdc1aQ8CIG0 Gm27502-201ENSMUST00000183495 199 ntBASIC26.16■■□□□ 1.78
Depdc1aQ8CIG0 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC26.15■■□□□ 1.78
Depdc1aQ8CIG0 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Depdc1aQ8CIG0 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
Depdc1aQ8CIG0 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC26.14■■□□□ 1.78
Depdc1aQ8CIG0 AC151971.4-201ENSMUST00000214717 704 ntBASIC26.14■■□□□ 1.78
Depdc1aQ8CIG0 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
Depdc1aQ8CIG0 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Depdc1aQ8CIG0 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC26.14■■□□□ 1.77
Depdc1aQ8CIG0 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Depdc1aQ8CIG0 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Depdc1aQ8CIG0 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Depdc1aQ8CIG0 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC26.13■■□□□ 1.77
Depdc1aQ8CIG0 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Depdc1aQ8CIG0 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Depdc1aQ8CIG0 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Depdc1aQ8CIG0 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC26.12■■□□□ 1.77
Depdc1aQ8CIG0 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Depdc1aQ8CIG0 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Depdc1aQ8CIG0 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Depdc1aQ8CIG0 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC26.1■■□□□ 1.77
Depdc1aQ8CIG0 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Depdc1aQ8CIG0 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Depdc1aQ8CIG0 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Depdc1aQ8CIG0 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Depdc1aQ8CIG0 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Depdc1aQ8CIG0 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Depdc1aQ8CIG0 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC26.06■■□□□ 1.76
Depdc1aQ8CIG0 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Depdc1aQ8CIG0 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Depdc1aQ8CIG0 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Depdc1aQ8CIG0 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC26.05■■□□□ 1.76
Depdc1aQ8CIG0 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
Depdc1aQ8CIG0 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Depdc1aQ8CIG0 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Depdc1aQ8CIG0 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC26.04■■□□□ 1.76
Depdc1aQ8CIG0 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Depdc1aQ8CIG0 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms