Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lysmd4Q8CC84 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Lysmd4Q8CC84 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Lysmd4Q8CC84 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Lysmd4Q8CC84 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.9
Lysmd4Q8CC84 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Lysmd4Q8CC84 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.64■□□□□ 0.89
Lysmd4Q8CC84 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Lysmd4Q8CC84 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Lysmd4Q8CC84 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lysmd4Q8CC84 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.63■□□□□ 0.89
Lysmd4Q8CC84 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC20.63■□□□□ 0.89
Lysmd4Q8CC84 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Lysmd4Q8CC84 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lysmd4Q8CC84 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lysmd4Q8CC84 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC20.62■□□□□ 0.89
Lysmd4Q8CC84 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lysmd4Q8CC84 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lysmd4Q8CC84 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.61■□□□□ 0.89
Lysmd4Q8CC84 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lysmd4Q8CC84 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Lysmd4Q8CC84 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.61■□□□□ 0.89
Lysmd4Q8CC84 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Lysmd4Q8CC84 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Lysmd4Q8CC84 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC20.61■□□□□ 0.89
Lysmd4Q8CC84 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC20.61■□□□□ 0.89
Lysmd4Q8CC84 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
Lysmd4Q8CC84 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Lysmd4Q8CC84 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
Lysmd4Q8CC84 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Lysmd4Q8CC84 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Lysmd4Q8CC84 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Lysmd4Q8CC84 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lysmd4Q8CC84 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lysmd4Q8CC84 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Lysmd4Q8CC84 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Lysmd4Q8CC84 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Lysmd4Q8CC84 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Lysmd4Q8CC84 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Lysmd4Q8CC84 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Lysmd4Q8CC84 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Lysmd4Q8CC84 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Lysmd4Q8CC84 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Lysmd4Q8CC84 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Lysmd4Q8CC84 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.57■□□□□ 0.88
Lysmd4Q8CC84 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lysmd4Q8CC84 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lysmd4Q8CC84 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Lysmd4Q8CC84 Gm24970-201ENSMUST00000175582 82 ntBASIC20.57■□□□□ 0.88
Lysmd4Q8CC84 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lysmd4Q8CC84 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lysmd4Q8CC84 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Lysmd4Q8CC84 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lysmd4Q8CC84 Tdp2-203ENSMUST00000223804 1136 ntBASIC20.56■□□□□ 0.88
Lysmd4Q8CC84 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lysmd4Q8CC84 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lysmd4Q8CC84 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.55■□□□□ 0.88
Lysmd4Q8CC84 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lysmd4Q8CC84 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.55■□□□□ 0.88
Lysmd4Q8CC84 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lysmd4Q8CC84 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Lysmd4Q8CC84 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Lysmd4Q8CC84 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Lysmd4Q8CC84 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lysmd4Q8CC84 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lysmd4Q8CC84 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lysmd4Q8CC84 Gm9397-201ENSMUST00000200125 605 ntBASIC20.53■□□□□ 0.88
Lysmd4Q8CC84 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lysmd4Q8CC84 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Lysmd4Q8CC84 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lysmd4Q8CC84 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Lysmd4Q8CC84 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Lysmd4Q8CC84 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Lysmd4Q8CC84 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Lysmd4Q8CC84 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Lysmd4Q8CC84 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Lysmd4Q8CC84 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.87
Lysmd4Q8CC84 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.87
Lysmd4Q8CC84 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lysmd4Q8CC84 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lysmd4Q8CC84 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lysmd4Q8CC84 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lysmd4Q8CC84 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lysmd4Q8CC84 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Lysmd4Q8CC84 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Lysmd4Q8CC84 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Lysmd4Q8CC84 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC20.5■□□□□ 0.87
Lysmd4Q8CC84 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Lysmd4Q8CC84 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Lysmd4Q8CC84 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lysmd4Q8CC84 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC20.49■□□□□ 0.87
Lysmd4Q8CC84 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lysmd4Q8CC84 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Lysmd4Q8CC84 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Lysmd4Q8CC84 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.48■□□□□ 0.87
Lysmd4Q8CC84 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Lysmd4Q8CC84 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Lysmd4Q8CC84 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Lysmd4Q8CC84 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.48■□□□□ 0.87
Lysmd4Q8CC84 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 11.9 ms