Protein–RNA interactions for Protein: Q8C3Q5

Shisa7, Protein shisa-7, mousemouse

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa7Q8C3Q5 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Shisa7Q8C3Q5 Cap2-205ENSMUST00000225824 1634 ntBASIC22.28■■□□□ 1.16
Shisa7Q8C3Q5 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC22.26■■□□□ 1.15
Shisa7Q8C3Q5 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Shisa7Q8C3Q5 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Shisa7Q8C3Q5 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Shisa7Q8C3Q5 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Shisa7Q8C3Q5 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
Shisa7Q8C3Q5 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Shisa7Q8C3Q5 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC22.24■■□□□ 1.15
Shisa7Q8C3Q5 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Shisa7Q8C3Q5 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC22.23■■□□□ 1.15
Shisa7Q8C3Q5 Gm9910-201ENSMUST00000195385 1550 ntBASIC22.23■■□□□ 1.15
Shisa7Q8C3Q5 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Shisa7Q8C3Q5 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Shisa7Q8C3Q5 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Shisa7Q8C3Q5 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Shisa7Q8C3Q5 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Shisa7Q8C3Q5 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Shisa7Q8C3Q5 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
Shisa7Q8C3Q5 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
Shisa7Q8C3Q5 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Shisa7Q8C3Q5 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Shisa7Q8C3Q5 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
Shisa7Q8C3Q5 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Shisa7Q8C3Q5 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC22.19■■□□□ 1.14
Shisa7Q8C3Q5 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Shisa7Q8C3Q5 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Shisa7Q8C3Q5 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Shisa7Q8C3Q5 AC153911.1-201ENSMUST00000220378 758 ntBASIC22.18■■□□□ 1.14
Shisa7Q8C3Q5 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Shisa7Q8C3Q5 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
Shisa7Q8C3Q5 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
Shisa7Q8C3Q5 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC22.17■■□□□ 1.14
Shisa7Q8C3Q5 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC22.17■■□□□ 1.14
Shisa7Q8C3Q5 Gm4419-202ENSMUST00000226239 1431 ntBASIC22.16■■□□□ 1.14
Shisa7Q8C3Q5 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
Shisa7Q8C3Q5 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Shisa7Q8C3Q5 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Shisa7Q8C3Q5 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Shisa7Q8C3Q5 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Shisa7Q8C3Q5 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Shisa7Q8C3Q5 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Shisa7Q8C3Q5 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Shisa7Q8C3Q5 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Shisa7Q8C3Q5 Terc-201ENSMUST00000082862 423 ntBASIC22.14■■□□□ 1.13
Shisa7Q8C3Q5 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
Shisa7Q8C3Q5 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Shisa7Q8C3Q5 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC22.13■■□□□ 1.13
Shisa7Q8C3Q5 Gm27502-201ENSMUST00000183495 199 ntBASIC22.13■■□□□ 1.13
Shisa7Q8C3Q5 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC22.13■■□□□ 1.13
Shisa7Q8C3Q5 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Shisa7Q8C3Q5 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
Shisa7Q8C3Q5 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Shisa7Q8C3Q5 AC122428.3-201ENSMUST00000215551 2290 ntBASIC22.13■■□□□ 1.13
Shisa7Q8C3Q5 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Shisa7Q8C3Q5 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC22.12■■□□□ 1.13
Shisa7Q8C3Q5 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Shisa7Q8C3Q5 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC22.12■■□□□ 1.13
Shisa7Q8C3Q5 Gm12366-201ENSMUST00000121722 873 ntBASIC22.12■■□□□ 1.13
Shisa7Q8C3Q5 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC22.12■■□□□ 1.13
Shisa7Q8C3Q5 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC22.12■■□□□ 1.13
Shisa7Q8C3Q5 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Shisa7Q8C3Q5 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC22.12■■□□□ 1.13
Shisa7Q8C3Q5 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Shisa7Q8C3Q5 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC22.12■■□□□ 1.13
Shisa7Q8C3Q5 Gm5786-201ENSMUST00000085368 882 ntBASIC22.12■■□□□ 1.13
Shisa7Q8C3Q5 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC22.12■■□□□ 1.13
Shisa7Q8C3Q5 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC22.12■■□□□ 1.13
Shisa7Q8C3Q5 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Shisa7Q8C3Q5 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Shisa7Q8C3Q5 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Shisa7Q8C3Q5 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Shisa7Q8C3Q5 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Shisa7Q8C3Q5 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Shisa7Q8C3Q5 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Shisa7Q8C3Q5 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Shisa7Q8C3Q5 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Shisa7Q8C3Q5 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Shisa7Q8C3Q5 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Shisa7Q8C3Q5 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Shisa7Q8C3Q5 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
Shisa7Q8C3Q5 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Shisa7Q8C3Q5 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC22.07■■□□□ 1.12
Shisa7Q8C3Q5 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Shisa7Q8C3Q5 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Shisa7Q8C3Q5 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
Shisa7Q8C3Q5 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Shisa7Q8C3Q5 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Shisa7Q8C3Q5 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Shisa7Q8C3Q5 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Shisa7Q8C3Q5 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
Shisa7Q8C3Q5 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Shisa7Q8C3Q5 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC22.04■■□□□ 1.12
Shisa7Q8C3Q5 AC151971.4-201ENSMUST00000214717 704 ntBASIC22.04■■□□□ 1.12
Shisa7Q8C3Q5 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Shisa7Q8C3Q5 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Shisa7Q8C3Q5 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Shisa7Q8C3Q5 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC22.03■■□□□ 1.12
Shisa7Q8C3Q5 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 74.4 ms