Protein–RNA interactions for Protein: Q8C263

Ska3, Spindle and kinetochore-associated protein 3, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska3Q8C263 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ska3Q8C263 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Ska3Q8C263 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.53■■□□□ 1.04
Ska3Q8C263 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ska3Q8C263 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ska3Q8C263 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Ska3Q8C263 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ska3Q8C263 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Ska3Q8C263 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ska3Q8C263 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ska3Q8C263 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Ska3Q8C263 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Ska3Q8C263 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ska3Q8C263 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ska3Q8C263 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ska3Q8C263 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
Ska3Q8C263 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC21.5■■□□□ 1.03
Ska3Q8C263 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Ska3Q8C263 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.49■■□□□ 1.03
Ska3Q8C263 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ska3Q8C263 AC167019.3-201ENSMUST00000228225 1266 ntBASIC21.49■■□□□ 1.03
Ska3Q8C263 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ska3Q8C263 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ska3Q8C263 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Ska3Q8C263 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ska3Q8C263 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ska3Q8C263 Gm13889-201ENSMUST00000099689 1386 ntBASIC21.48■■□□□ 1.03
Ska3Q8C263 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Ska3Q8C263 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ska3Q8C263 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ska3Q8C263 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Ska3Q8C263 Gm5987-201ENSMUST00000196433 1151 ntBASIC21.47■■□□□ 1.03
Ska3Q8C263 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC21.47■■□□□ 1.03
Ska3Q8C263 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ska3Q8C263 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Ska3Q8C263 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Ska3Q8C263 Gm4419-202ENSMUST00000226239 1431 ntBASIC21.46■■□□□ 1.03
Ska3Q8C263 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC21.46■■□□□ 1.03
Ska3Q8C263 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC21.46■■□□□ 1.03
Ska3Q8C263 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.46■■□□□ 1.03
Ska3Q8C263 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Ska3Q8C263 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ska3Q8C263 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ska3Q8C263 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Ska3Q8C263 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ska3Q8C263 Mir3960-201ENSMUST00000198213 73 ntBASIC21.44■■□□□ 1.02
Ska3Q8C263 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ska3Q8C263 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ska3Q8C263 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ska3Q8C263 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ska3Q8C263 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Ska3Q8C263 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ska3Q8C263 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.42■■□□□ 1.02
Ska3Q8C263 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ska3Q8C263 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ska3Q8C263 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.41■■□□□ 1.02
Ska3Q8C263 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC21.41■■□□□ 1.02
Ska3Q8C263 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ska3Q8C263 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ska3Q8C263 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ska3Q8C263 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ska3Q8C263 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.4■■□□□ 1.02
Ska3Q8C263 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Ska3Q8C263 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ska3Q8C263 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
Ska3Q8C263 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Ska3Q8C263 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Ska3Q8C263 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ska3Q8C263 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ska3Q8C263 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ska3Q8C263 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.38■■□□□ 1.01
Ska3Q8C263 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Ska3Q8C263 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Ska3Q8C263 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ska3Q8C263 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Ska3Q8C263 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ska3Q8C263 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.36■■□□□ 1.01
Ska3Q8C263 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ska3Q8C263 Gm45364-201ENSMUST00000210883 159 ntBASIC21.36■■□□□ 1.01
Ska3Q8C263 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.36■■□□□ 1.01
Ska3Q8C263 Gm6311-201ENSMUST00000073790 878 ntBASIC21.36■■□□□ 1.01
Ska3Q8C263 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Ska3Q8C263 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ska3Q8C263 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ska3Q8C263 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ska3Q8C263 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ska3Q8C263 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Ska3Q8C263 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC21.35■■□□□ 1.01
Ska3Q8C263 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ska3Q8C263 Gm9812-201ENSMUST00000061934 968 ntBASIC21.35■■□□□ 1.01
Ska3Q8C263 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ska3Q8C263 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Ska3Q8C263 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ska3Q8C263 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ska3Q8C263 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ska3Q8C263 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Ska3Q8C263 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.32■■□□□ 1
Ska3Q8C263 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
Ska3Q8C263 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Ska3Q8C263 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC21.31■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 103.8 ms