Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
Samm50Q8BGH2 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Samm50Q8BGH2 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
Samm50Q8BGH2 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC26.8■■□□□ 1.88
Samm50Q8BGH2 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
Samm50Q8BGH2 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
Samm50Q8BGH2 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Samm50Q8BGH2 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
Samm50Q8BGH2 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC26.77■■□□□ 1.88
Samm50Q8BGH2 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC26.77■■□□□ 1.88
Samm50Q8BGH2 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
Samm50Q8BGH2 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Samm50Q8BGH2 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC26.77■■□□□ 1.88
Samm50Q8BGH2 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC26.77■■□□□ 1.88
Samm50Q8BGH2 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC26.77■■□□□ 1.88
Samm50Q8BGH2 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Samm50Q8BGH2 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC26.76■■□□□ 1.88
Samm50Q8BGH2 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
Samm50Q8BGH2 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Samm50Q8BGH2 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Samm50Q8BGH2 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
Samm50Q8BGH2 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC26.76■■□□□ 1.87
Samm50Q8BGH2 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC26.76■■□□□ 1.87
Samm50Q8BGH2 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Samm50Q8BGH2 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Samm50Q8BGH2 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Samm50Q8BGH2 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Samm50Q8BGH2 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Samm50Q8BGH2 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
Samm50Q8BGH2 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Samm50Q8BGH2 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Samm50Q8BGH2 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
Samm50Q8BGH2 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
Samm50Q8BGH2 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC26.72■■□□□ 1.87
Samm50Q8BGH2 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Samm50Q8BGH2 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
Samm50Q8BGH2 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
Samm50Q8BGH2 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC26.71■■□□□ 1.87
Samm50Q8BGH2 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC26.71■■□□□ 1.87
Samm50Q8BGH2 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
Samm50Q8BGH2 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Samm50Q8BGH2 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC26.69■■□□□ 1.86
Samm50Q8BGH2 Gm11599-201ENSMUST00000118720 878 ntBASIC26.69■■□□□ 1.86
Samm50Q8BGH2 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Samm50Q8BGH2 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Samm50Q8BGH2 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC26.69■■□□□ 1.86
Samm50Q8BGH2 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Samm50Q8BGH2 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC26.67■■□□□ 1.86
Samm50Q8BGH2 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
Samm50Q8BGH2 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Samm50Q8BGH2 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Samm50Q8BGH2 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Samm50Q8BGH2 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC26.65■■□□□ 1.86
Samm50Q8BGH2 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Samm50Q8BGH2 Particl-201ENSMUST00000205370 1560 ntBASIC26.63■■□□□ 1.85
Samm50Q8BGH2 AC131739.1-201ENSMUST00000221692 1245 ntBASIC26.63■■□□□ 1.85
Samm50Q8BGH2 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC26.62■■□□□ 1.85
Samm50Q8BGH2 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC26.62■■□□□ 1.85
Samm50Q8BGH2 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC26.62■■□□□ 1.85
Samm50Q8BGH2 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC26.62■■□□□ 1.85
Samm50Q8BGH2 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
Samm50Q8BGH2 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC26.61■■□□□ 1.85
Samm50Q8BGH2 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC26.6■■□□□ 1.85
Samm50Q8BGH2 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
Samm50Q8BGH2 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
Samm50Q8BGH2 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC26.59■■□□□ 1.85
Samm50Q8BGH2 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
Samm50Q8BGH2 Gm37847-201ENSMUST00000192163 1497 ntBASIC26.59■■□□□ 1.85
Samm50Q8BGH2 Gm31748-201ENSMUST00000194938 1497 ntBASIC26.59■■□□□ 1.85
Samm50Q8BGH2 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Samm50Q8BGH2 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Samm50Q8BGH2 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
Samm50Q8BGH2 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Samm50Q8BGH2 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.84
Samm50Q8BGH2 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC26.57■■□□□ 1.84
Samm50Q8BGH2 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Samm50Q8BGH2 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC26.56■■□□□ 1.84
Samm50Q8BGH2 H3f3aos-201ENSMUST00000097448 2905 ntBASIC26.56■■□□□ 1.84
Samm50Q8BGH2 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Samm50Q8BGH2 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Samm50Q8BGH2 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC26.55■■□□□ 1.84
Samm50Q8BGH2 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC26.53■■□□□ 1.84
Samm50Q8BGH2 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Samm50Q8BGH2 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC26.53■■□□□ 1.84
Samm50Q8BGH2 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC26.52■■□□□ 1.84
Samm50Q8BGH2 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Samm50Q8BGH2 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Samm50Q8BGH2 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
Samm50Q8BGH2 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Samm50Q8BGH2 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC26.51■■□□□ 1.83
Samm50Q8BGH2 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Samm50Q8BGH2 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC26.5■■□□□ 1.83
Samm50Q8BGH2 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC26.5■■□□□ 1.83
Samm50Q8BGH2 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Samm50Q8BGH2 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC26.48■■□□□ 1.83
Samm50Q8BGH2 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Samm50Q8BGH2 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Samm50Q8BGH2 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Samm50Q8BGH2 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC26.47■■□□□ 1.83
Samm50Q8BGH2 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
Retrieved 100 of 76,532 protein–RNA pairs in 12.8 ms