Protein–RNA interactions for Protein: Q80XG9

Lrrtm4, Leucine-rich repeat transmembrane neuronal protein 4, mousemouse

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrtm4Q80XG9 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
Lrrtm4Q80XG9 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Lrrtm4Q80XG9 Gm11175-201ENSMUST00000116172 543 ntBASIC22.45■■□□□ 1.18
Lrrtm4Q80XG9 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Lrrtm4Q80XG9 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Lrrtm4Q80XG9 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Lrrtm4Q80XG9 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Lrrtm4Q80XG9 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Lrrtm4Q80XG9 Gm4419-202ENSMUST00000226239 1431 ntBASIC22.43■■□□□ 1.18
Lrrtm4Q80XG9 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC22.43■■□□□ 1.18
Lrrtm4Q80XG9 Scarna2-201ENSMUST00000157560 414 ntBASIC22.43■■□□□ 1.18
Lrrtm4Q80XG9 AC122317.2-201ENSMUST00000218708 1248 ntBASIC22.43■■□□□ 1.18
Lrrtm4Q80XG9 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Lrrtm4Q80XG9 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC22.42■■□□□ 1.18
Lrrtm4Q80XG9 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Lrrtm4Q80XG9 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
Lrrtm4Q80XG9 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Lrrtm4Q80XG9 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC22.42■■□□□ 1.18
Lrrtm4Q80XG9 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
Lrrtm4Q80XG9 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Lrrtm4Q80XG9 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC22.41■■□□□ 1.18
Lrrtm4Q80XG9 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC22.41■■□□□ 1.18
Lrrtm4Q80XG9 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Lrrtm4Q80XG9 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Lrrtm4Q80XG9 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
Lrrtm4Q80XG9 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Lrrtm4Q80XG9 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
Lrrtm4Q80XG9 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Lrrtm4Q80XG9 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
Lrrtm4Q80XG9 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Lrrtm4Q80XG9 Gm9806-201ENSMUST00000051080 552 ntBASIC22.4■■□□□ 1.18
Lrrtm4Q80XG9 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
Lrrtm4Q80XG9 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Lrrtm4Q80XG9 Mir6538-201ENSMUST00000183713 110 ntBASIC22.39■■□□□ 1.17
Lrrtm4Q80XG9 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Lrrtm4Q80XG9 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Lrrtm4Q80XG9 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Lrrtm4Q80XG9 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC22.38■■□□□ 1.17
Lrrtm4Q80XG9 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Lrrtm4Q80XG9 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Lrrtm4Q80XG9 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Lrrtm4Q80XG9 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Lrrtm4Q80XG9 Gm11687-201ENSMUST00000118911 886 ntBASIC22.36■■□□□ 1.17
Lrrtm4Q80XG9 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Lrrtm4Q80XG9 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Lrrtm4Q80XG9 AC153911.1-201ENSMUST00000220378 758 ntBASIC22.35■■□□□ 1.17
Lrrtm4Q80XG9 Gm16437-201ENSMUST00000025669 507 ntBASIC22.35■■□□□ 1.17
Lrrtm4Q80XG9 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Lrrtm4Q80XG9 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC22.34■■□□□ 1.17
Lrrtm4Q80XG9 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
Lrrtm4Q80XG9 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
Lrrtm4Q80XG9 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
Lrrtm4Q80XG9 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Lrrtm4Q80XG9 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
Lrrtm4Q80XG9 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Lrrtm4Q80XG9 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
Lrrtm4Q80XG9 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Lrrtm4Q80XG9 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
Lrrtm4Q80XG9 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
Lrrtm4Q80XG9 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Lrrtm4Q80XG9 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
Lrrtm4Q80XG9 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
Lrrtm4Q80XG9 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Lrrtm4Q80XG9 Terc-201ENSMUST00000082862 423 ntBASIC22.29■■□□□ 1.16
Lrrtm4Q80XG9 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Lrrtm4Q80XG9 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Lrrtm4Q80XG9 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Lrrtm4Q80XG9 Gm9910-201ENSMUST00000195385 1550 ntBASIC22.29■■□□□ 1.16
Lrrtm4Q80XG9 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC22.28■■□□□ 1.16
Lrrtm4Q80XG9 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC22.28■■□□□ 1.16
Lrrtm4Q80XG9 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Lrrtm4Q80XG9 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC22.27■■□□□ 1.16
Lrrtm4Q80XG9 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Lrrtm4Q80XG9 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Lrrtm4Q80XG9 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Lrrtm4Q80XG9 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
Lrrtm4Q80XG9 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Lrrtm4Q80XG9 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC22.26■■□□□ 1.15
Lrrtm4Q80XG9 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
Lrrtm4Q80XG9 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC22.26■■□□□ 1.15
Lrrtm4Q80XG9 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Lrrtm4Q80XG9 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Lrrtm4Q80XG9 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Lrrtm4Q80XG9 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Lrrtm4Q80XG9 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Lrrtm4Q80XG9 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
Lrrtm4Q80XG9 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Lrrtm4Q80XG9 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC22.25■■□□□ 1.15
Lrrtm4Q80XG9 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Lrrtm4Q80XG9 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Lrrtm4Q80XG9 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Lrrtm4Q80XG9 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Lrrtm4Q80XG9 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC22.23■■□□□ 1.15
Lrrtm4Q80XG9 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Lrrtm4Q80XG9 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Lrrtm4Q80XG9 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Lrrtm4Q80XG9 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
Lrrtm4Q80XG9 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Lrrtm4Q80XG9 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Lrrtm4Q80XG9 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC22.22■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms