Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pif1Q80SX8 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Pif1Q80SX8 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pif1Q80SX8 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pif1Q80SX8 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.24■□□□□ 0.99
Pif1Q80SX8 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pif1Q80SX8 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pif1Q80SX8 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Pif1Q80SX8 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pif1Q80SX8 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Pif1Q80SX8 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pif1Q80SX8 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.23■□□□□ 0.99
Pif1Q80SX8 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pif1Q80SX8 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pif1Q80SX8 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pif1Q80SX8 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.22■□□□□ 0.99
Pif1Q80SX8 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pif1Q80SX8 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pif1Q80SX8 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Pif1Q80SX8 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC21.21■□□□□ 0.99
Pif1Q80SX8 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pif1Q80SX8 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC21.2■□□□□ 0.99
Pif1Q80SX8 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pif1Q80SX8 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pif1Q80SX8 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.19■□□□□ 0.98
Pif1Q80SX8 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC21.19■□□□□ 0.98
Pif1Q80SX8 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pif1Q80SX8 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
Pif1Q80SX8 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pif1Q80SX8 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Pif1Q80SX8 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pif1Q80SX8 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Pif1Q80SX8 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pif1Q80SX8 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Pif1Q80SX8 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pif1Q80SX8 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
Pif1Q80SX8 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Pif1Q80SX8 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pif1Q80SX8 Amer2-203ENSMUST00000225247 2662 ntBASIC21.16■□□□□ 0.98
Pif1Q80SX8 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pif1Q80SX8 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pif1Q80SX8 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pif1Q80SX8 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC21.15■□□□□ 0.98
Pif1Q80SX8 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Pif1Q80SX8 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Pif1Q80SX8 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pif1Q80SX8 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC21.14■□□□□ 0.97
Pif1Q80SX8 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC21.14■□□□□ 0.97
Pif1Q80SX8 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Pif1Q80SX8 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pif1Q80SX8 Gm5067-201ENSMUST00000170449 1009 ntBASIC21.13■□□□□ 0.97
Pif1Q80SX8 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Pif1Q80SX8 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pif1Q80SX8 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pif1Q80SX8 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pif1Q80SX8 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pif1Q80SX8 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pif1Q80SX8 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pif1Q80SX8 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC21.12■□□□□ 0.97
Pif1Q80SX8 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Pif1Q80SX8 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Pif1Q80SX8 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pif1Q80SX8 AC151971.4-201ENSMUST00000214717 704 ntBASIC21.11■□□□□ 0.97
Pif1Q80SX8 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC21.11■□□□□ 0.97
Pif1Q80SX8 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pif1Q80SX8 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.11■□□□□ 0.97
Pif1Q80SX8 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pif1Q80SX8 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC21.1■□□□□ 0.97
Pif1Q80SX8 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Pif1Q80SX8 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pif1Q80SX8 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pif1Q80SX8 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pif1Q80SX8 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Pif1Q80SX8 AC153911.1-201ENSMUST00000220378 758 ntBASIC21.09■□□□□ 0.97
Pif1Q80SX8 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pif1Q80SX8 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pif1Q80SX8 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pif1Q80SX8 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pif1Q80SX8 Terc-201ENSMUST00000082862 423 ntBASIC21.08■□□□□ 0.97
Pif1Q80SX8 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Pif1Q80SX8 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pif1Q80SX8 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pif1Q80SX8 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Pif1Q80SX8 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pif1Q80SX8 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pif1Q80SX8 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Pif1Q80SX8 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
Pif1Q80SX8 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pif1Q80SX8 Gm10420-201ENSMUST00000121713 882 ntBASIC21.05■□□□□ 0.96
Pif1Q80SX8 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC21.05■□□□□ 0.96
Pif1Q80SX8 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Pif1Q80SX8 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pif1Q80SX8 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Pif1Q80SX8 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pif1Q80SX8 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pif1Q80SX8 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.04■□□□□ 0.96
Pif1Q80SX8 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pif1Q80SX8 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.04■□□□□ 0.96
Pif1Q80SX8 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.04■□□□□ 0.96
Pif1Q80SX8 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms