Protein–RNA interactions for Protein: Q6ZWR6

Syne1, Nesprin-1, mousemouse

Predictions only

Length 8,799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1Q6ZWR6 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Syne1Q6ZWR6 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
Syne1Q6ZWR6 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC7.86□□□□□ -1.15
Syne1Q6ZWR6 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC7.86□□□□□ -1.15
Syne1Q6ZWR6 Gm9910-201ENSMUST00000195385 1550 ntBASIC7.86□□□□□ -1.15
Syne1Q6ZWR6 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC7.86□□□□□ -1.15
Syne1Q6ZWR6 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC7.86□□□□□ -1.15
Syne1Q6ZWR6 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
Syne1Q6ZWR6 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC7.86□□□□□ -1.15
Syne1Q6ZWR6 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Syne1Q6ZWR6 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC7.86□□□□□ -1.15
Syne1Q6ZWR6 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Syne1Q6ZWR6 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Syne1Q6ZWR6 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC7.85□□□□□ -1.15
Syne1Q6ZWR6 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
Syne1Q6ZWR6 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
Syne1Q6ZWR6 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Syne1Q6ZWR6 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Syne1Q6ZWR6 Gm5921-201ENSMUST00000075898 882 ntBASIC7.85□□□□□ -1.15
Syne1Q6ZWR6 Gm43445-201ENSMUST00000198564 2091 ntBASIC7.85□□□□□ -1.15
Syne1Q6ZWR6 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Syne1Q6ZWR6 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
Syne1Q6ZWR6 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC7.85□□□□□ -1.15
Syne1Q6ZWR6 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC7.85□□□□□ -1.15
Syne1Q6ZWR6 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
Syne1Q6ZWR6 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC7.84□□□□□ -1.15
Syne1Q6ZWR6 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Syne1Q6ZWR6 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Syne1Q6ZWR6 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC7.84□□□□□ -1.15
Syne1Q6ZWR6 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC7.83□□□□□ -1.16
Syne1Q6ZWR6 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC7.83□□□□□ -1.16
Syne1Q6ZWR6 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC7.83□□□□□ -1.16
Syne1Q6ZWR6 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Syne1Q6ZWR6 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC7.83□□□□□ -1.16
Syne1Q6ZWR6 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC7.82□□□□□ -1.16
Syne1Q6ZWR6 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Syne1Q6ZWR6 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC7.82□□□□□ -1.16
Syne1Q6ZWR6 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Syne1Q6ZWR6 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
Syne1Q6ZWR6 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC7.82□□□□□ -1.16
Syne1Q6ZWR6 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC7.82□□□□□ -1.16
Syne1Q6ZWR6 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
Syne1Q6ZWR6 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Syne1Q6ZWR6 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC7.81□□□□□ -1.16
Syne1Q6ZWR6 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Syne1Q6ZWR6 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC7.81□□□□□ -1.16
Syne1Q6ZWR6 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Syne1Q6ZWR6 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
Syne1Q6ZWR6 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Syne1Q6ZWR6 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC7.81□□□□□ -1.16
Syne1Q6ZWR6 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Syne1Q6ZWR6 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Syne1Q6ZWR6 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
Syne1Q6ZWR6 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Syne1Q6ZWR6 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Syne1Q6ZWR6 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
Syne1Q6ZWR6 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Syne1Q6ZWR6 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
Syne1Q6ZWR6 Gm37136-201ENSMUST00000194368 194 ntBASIC7.8□□□□□ -1.16
Syne1Q6ZWR6 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Syne1Q6ZWR6 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Syne1Q6ZWR6 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Syne1Q6ZWR6 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Syne1Q6ZWR6 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Syne1Q6ZWR6 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC7.79□□□□□ -1.16
Syne1Q6ZWR6 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Syne1Q6ZWR6 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
Syne1Q6ZWR6 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Syne1Q6ZWR6 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC7.79□□□□□ -1.16
Syne1Q6ZWR6 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Syne1Q6ZWR6 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Syne1Q6ZWR6 AC093043.1-201ENSMUST00000226700 898 ntBASIC7.79□□□□□ -1.16
Syne1Q6ZWR6 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC7.79□□□□□ -1.16
Syne1Q6ZWR6 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Syne1Q6ZWR6 Gm10420-201ENSMUST00000121713 882 ntBASIC7.79□□□□□ -1.16
Syne1Q6ZWR6 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
Syne1Q6ZWR6 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
Syne1Q6ZWR6 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC7.78□□□□□ -1.16
Syne1Q6ZWR6 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC7.78□□□□□ -1.16
Syne1Q6ZWR6 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Syne1Q6ZWR6 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC7.78□□□□□ -1.16
Syne1Q6ZWR6 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Syne1Q6ZWR6 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Syne1Q6ZWR6 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Syne1Q6ZWR6 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Syne1Q6ZWR6 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC7.78□□□□□ -1.16
Syne1Q6ZWR6 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC7.78□□□□□ -1.16
Syne1Q6ZWR6 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Syne1Q6ZWR6 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
Syne1Q6ZWR6 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Syne1Q6ZWR6 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Syne1Q6ZWR6 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Syne1Q6ZWR6 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Syne1Q6ZWR6 Gm13238-201ENSMUST00000117655 780 ntBASIC7.76□□□□□ -1.17
Syne1Q6ZWR6 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Syne1Q6ZWR6 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Syne1Q6ZWR6 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Syne1Q6ZWR6 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Syne1Q6ZWR6 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Syne1Q6ZWR6 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC7.76□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms