Protein–RNA interactions for Protein: Q6PCM1

Kdm3a, Lysine-specific demethylase 3A, mousemouse

Predictions only

Length 1,323 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm3aQ6PCM1 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC28.07■■■□□ 2.08
Kdm3aQ6PCM1 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Kdm3aQ6PCM1 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC28.06■■■□□ 2.08
Kdm3aQ6PCM1 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Kdm3aQ6PCM1 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC28.04■■■□□ 2.08
Kdm3aQ6PCM1 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
Kdm3aQ6PCM1 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC28.04■■■□□ 2.08
Kdm3aQ6PCM1 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Kdm3aQ6PCM1 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC28.04■■■□□ 2.08
Kdm3aQ6PCM1 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Kdm3aQ6PCM1 Gm16437-201ENSMUST00000025669 507 ntBASIC28.03■■■□□ 2.08
Kdm3aQ6PCM1 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
Kdm3aQ6PCM1 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Kdm3aQ6PCM1 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC28.02■■■□□ 2.08
Kdm3aQ6PCM1 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
Kdm3aQ6PCM1 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC28■■■□□ 2.07
Kdm3aQ6PCM1 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Kdm3aQ6PCM1 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC28■■■□□ 2.07
Kdm3aQ6PCM1 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
Kdm3aQ6PCM1 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC27.99■■■□□ 2.07
Kdm3aQ6PCM1 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
Kdm3aQ6PCM1 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Kdm3aQ6PCM1 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Kdm3aQ6PCM1 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC27.98■■■□□ 2.07
Kdm3aQ6PCM1 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
Kdm3aQ6PCM1 Gm9910-201ENSMUST00000195385 1550 ntBASIC27.98■■■□□ 2.07
Kdm3aQ6PCM1 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC27.98■■■□□ 2.07
Kdm3aQ6PCM1 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
Kdm3aQ6PCM1 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC27.97■■■□□ 2.07
Kdm3aQ6PCM1 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC27.97■■■□□ 2.07
Kdm3aQ6PCM1 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC27.97■■■□□ 2.07
Kdm3aQ6PCM1 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
Kdm3aQ6PCM1 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
Kdm3aQ6PCM1 Terc-201ENSMUST00000082862 423 ntBASIC27.97■■■□□ 2.07
Kdm3aQ6PCM1 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC27.96■■■□□ 2.07
Kdm3aQ6PCM1 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
Kdm3aQ6PCM1 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
Kdm3aQ6PCM1 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC27.95■■■□□ 2.07
Kdm3aQ6PCM1 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC27.95■■■□□ 2.07
Kdm3aQ6PCM1 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC27.95■■■□□ 2.06
Kdm3aQ6PCM1 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
Kdm3aQ6PCM1 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
Kdm3aQ6PCM1 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC27.92■■■□□ 2.06
Kdm3aQ6PCM1 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC27.92■■■□□ 2.06
Kdm3aQ6PCM1 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC27.92■■■□□ 2.06
Kdm3aQ6PCM1 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC27.92■■■□□ 2.06
Kdm3aQ6PCM1 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC27.92■■■□□ 2.06
Kdm3aQ6PCM1 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
Kdm3aQ6PCM1 AC122428.3-201ENSMUST00000215551 2290 ntBASIC27.91■■■□□ 2.06
Kdm3aQ6PCM1 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
Kdm3aQ6PCM1 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
Kdm3aQ6PCM1 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
Kdm3aQ6PCM1 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
Kdm3aQ6PCM1 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
Kdm3aQ6PCM1 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC27.89■■■□□ 2.05
Kdm3aQ6PCM1 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
Kdm3aQ6PCM1 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
Kdm3aQ6PCM1 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC27.87■■■□□ 2.05
Kdm3aQ6PCM1 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Kdm3aQ6PCM1 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Kdm3aQ6PCM1 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC27.86■■■□□ 2.05
Kdm3aQ6PCM1 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC27.85■■■□□ 2.05
Kdm3aQ6PCM1 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
Kdm3aQ6PCM1 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
Kdm3aQ6PCM1 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
Kdm3aQ6PCM1 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC27.83■■■□□ 2.05
Kdm3aQ6PCM1 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC27.83■■■□□ 2.05
Kdm3aQ6PCM1 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Kdm3aQ6PCM1 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
Kdm3aQ6PCM1 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Kdm3aQ6PCM1 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC27.82■■■□□ 2.04
Kdm3aQ6PCM1 Cap2-205ENSMUST00000225824 1634 ntBASIC27.81■■■□□ 2.04
Kdm3aQ6PCM1 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Kdm3aQ6PCM1 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
Kdm3aQ6PCM1 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Kdm3aQ6PCM1 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
Kdm3aQ6PCM1 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Kdm3aQ6PCM1 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Kdm3aQ6PCM1 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Kdm3aQ6PCM1 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Kdm3aQ6PCM1 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Kdm3aQ6PCM1 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC27.79■■■□□ 2.04
Kdm3aQ6PCM1 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
Kdm3aQ6PCM1 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
Kdm3aQ6PCM1 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
Kdm3aQ6PCM1 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC27.79■■■□□ 2.04
Kdm3aQ6PCM1 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Kdm3aQ6PCM1 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Kdm3aQ6PCM1 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Kdm3aQ6PCM1 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Kdm3aQ6PCM1 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC27.78■■■□□ 2.04
Kdm3aQ6PCM1 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
Kdm3aQ6PCM1 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC27.77■■■□□ 2.04
Kdm3aQ6PCM1 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
Kdm3aQ6PCM1 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Kdm3aQ6PCM1 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.04
Kdm3aQ6PCM1 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC27.76■■■□□ 2.03
Kdm3aQ6PCM1 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
Kdm3aQ6PCM1 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
Kdm3aQ6PCM1 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
Retrieved 100 of 76,532 protein–RNA pairs in 70.3 ms