Protein–RNA interactions for Protein: Q61115

Ptch1, Protein patched homolog 1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch1Q61115 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC34.68■■■■□ 3.14
Ptch1Q61115 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC34.68■■■■□ 3.14
Ptch1Q61115 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC34.68■■■■□ 3.14
Ptch1Q61115 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC34.68■■■■□ 3.14
Ptch1Q61115 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC34.67■■■■□ 3.14
Ptch1Q61115 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC34.67■■■■□ 3.14
Ptch1Q61115 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC34.67■■■■□ 3.14
Ptch1Q61115 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC34.66■■■■□ 3.14
Ptch1Q61115 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC34.65■■■■□ 3.14
Ptch1Q61115 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC34.65■■■■□ 3.14
Ptch1Q61115 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC34.65■■■■□ 3.14
Ptch1Q61115 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC34.64■■■■□ 3.14
Ptch1Q61115 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC34.64■■■■□ 3.14
Ptch1Q61115 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC34.63■■■■□ 3.13
Ptch1Q61115 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC34.61■■■■□ 3.13
Ptch1Q61115 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC34.6■■■■□ 3.13
Ptch1Q61115 Gm13238-201ENSMUST00000117655 780 ntBASIC34.59■■■■□ 3.13
Ptch1Q61115 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC34.58■■■■□ 3.13
Ptch1Q61115 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC34.58■■■■□ 3.13
Ptch1Q61115 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC34.58■■■■□ 3.13
Ptch1Q61115 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC34.57■■■■□ 3.13
Ptch1Q61115 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC34.57■■■■□ 3.13
Ptch1Q61115 AC153911.1-201ENSMUST00000220378 758 ntBASIC34.57■■■■□ 3.13
Ptch1Q61115 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC34.57■■■■□ 3.13
Ptch1Q61115 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC34.56■■■■□ 3.12
Ptch1Q61115 Terc-201ENSMUST00000082862 423 ntBASIC34.56■■■■□ 3.12
Ptch1Q61115 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC34.55■■■■□ 3.12
Ptch1Q61115 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC34.55■■■■□ 3.12
Ptch1Q61115 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC34.55■■■■□ 3.12
Ptch1Q61115 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC34.54■■■■□ 3.12
Ptch1Q61115 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC34.54■■■■□ 3.12
Ptch1Q61115 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC34.54■■■■□ 3.12
Ptch1Q61115 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC34.54■■■■□ 3.12
Ptch1Q61115 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC34.53■■■■□ 3.12
Ptch1Q61115 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC34.53■■■■□ 3.12
Ptch1Q61115 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
Ptch1Q61115 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
Ptch1Q61115 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
Ptch1Q61115 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC34.53■■■■□ 3.12
Ptch1Q61115 Rps24-207ENSMUST00000224568 714 ntBASIC34.52■■■■□ 3.12
Ptch1Q61115 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC34.52■■■■□ 3.12
Ptch1Q61115 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC34.52■■■■□ 3.12
Ptch1Q61115 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC34.51■■■■□ 3.12
Ptch1Q61115 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC34.5■■■■□ 3.11
Ptch1Q61115 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC34.5■■■■□ 3.11
Ptch1Q61115 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC34.5■■■■□ 3.11
Ptch1Q61115 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC34.5■■■■□ 3.11
Ptch1Q61115 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC34.49■■■■□ 3.11
Ptch1Q61115 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC34.49■■■■□ 3.11
Ptch1Q61115 Gm15820-201ENSMUST00000201566 728 ntBASIC34.49■■■■□ 3.11
Ptch1Q61115 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC34.49■■■■□ 3.11
Ptch1Q61115 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC34.48■■■■□ 3.11
Ptch1Q61115 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC34.47■■■■□ 3.11
Ptch1Q61115 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC34.46■■■■□ 3.11
Ptch1Q61115 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC34.46■■■■□ 3.11
Ptch1Q61115 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC34.46■■■■□ 3.11
Ptch1Q61115 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC34.46■■■■□ 3.11
Ptch1Q61115 Gm43566-201ENSMUST00000196851 808 ntBASIC34.45■■■■□ 3.11
Ptch1Q61115 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC34.44■■■■□ 3.1
Ptch1Q61115 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC34.44■■■■□ 3.1
Ptch1Q61115 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC34.44■■■■□ 3.1
Ptch1Q61115 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC34.44■■■■□ 3.1
Ptch1Q61115 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC34.44■■■■□ 3.1
Ptch1Q61115 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC34.43■■■■□ 3.1
Ptch1Q61115 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC34.42■■■■□ 3.1
Ptch1Q61115 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC34.42■■■■□ 3.1
Ptch1Q61115 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC34.41■■■■□ 3.1
Ptch1Q61115 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC34.41■■■■□ 3.1
Ptch1Q61115 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC34.41■■■■□ 3.1
Ptch1Q61115 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC34.41■■■■□ 3.1
Ptch1Q61115 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC34.41■■■■□ 3.1
Ptch1Q61115 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC34.4■■■■□ 3.1
Ptch1Q61115 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC34.4■■■■□ 3.1
Ptch1Q61115 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC34.4■■■■□ 3.1
Ptch1Q61115 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC34.39■■■■□ 3.1
Ptch1Q61115 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC34.38■■■■□ 3.09
Ptch1Q61115 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC34.38■■■■□ 3.09
Ptch1Q61115 Gm45102-201ENSMUST00000207427 857 ntBASIC34.38■■■■□ 3.09
Ptch1Q61115 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC34.38■■■■□ 3.09
Ptch1Q61115 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC34.38■■■■□ 3.09
Ptch1Q61115 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC34.37■■■■□ 3.09
Ptch1Q61115 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC34.37■■■■□ 3.09
Ptch1Q61115 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC34.37■■■■□ 3.09
Ptch1Q61115 Gm14117-201ENSMUST00000122417 843 ntBASIC34.36■■■■□ 3.09
Ptch1Q61115 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC34.36■■■■□ 3.09
Ptch1Q61115 Gm14121-201ENSMUST00000121441 1380 ntBASIC34.35■■■■□ 3.09
Ptch1Q61115 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC34.34■■■■□ 3.09
Ptch1Q61115 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC34.34■■■■□ 3.09
Ptch1Q61115 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC34.34■■■■□ 3.09
Ptch1Q61115 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC34.33■■■■□ 3.09
Ptch1Q61115 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC34.33■■■■□ 3.09
Ptch1Q61115 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC34.33■■■■□ 3.09
Ptch1Q61115 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC34.32■■■■□ 3.08
Ptch1Q61115 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC34.31■■■■□ 3.08
Ptch1Q61115 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08
Ptch1Q61115 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08
Ptch1Q61115 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08
Ptch1Q61115 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08
Ptch1Q61115 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC34.3■■■■□ 3.08
Ptch1Q61115 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC34.3■■■■□ 3.08
Retrieved 100 of 76,532 protein–RNA pairs in 140.1 ms