Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
Tnfaip3Q60769 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Tnfaip3Q60769 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Tnfaip3Q60769 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Tnfaip3Q60769 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Tnfaip3Q60769 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Tnfaip3Q60769 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Tnfaip3Q60769 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC21.56■■□□□ 1.04
Tnfaip3Q60769 Gm9812-201ENSMUST00000061934 968 ntBASIC21.56■■□□□ 1.04
Tnfaip3Q60769 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Tnfaip3Q60769 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Tnfaip3Q60769 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Tnfaip3Q60769 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC21.55■■□□□ 1.04
Tnfaip3Q60769 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Tnfaip3Q60769 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Tnfaip3Q60769 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Tnfaip3Q60769 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.55■■□□□ 1.04
Tnfaip3Q60769 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Tnfaip3Q60769 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Tnfaip3Q60769 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Tnfaip3Q60769 Scarna2-201ENSMUST00000157560 414 ntBASIC21.54■■□□□ 1.04
Tnfaip3Q60769 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Tnfaip3Q60769 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Tnfaip3Q60769 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Tnfaip3Q60769 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Tnfaip3Q60769 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Tnfaip3Q60769 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC21.53■■□□□ 1.04
Tnfaip3Q60769 Gm9806-201ENSMUST00000051080 552 ntBASIC21.53■■□□□ 1.04
Tnfaip3Q60769 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Tnfaip3Q60769 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Tnfaip3Q60769 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Tnfaip3Q60769 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.52■■□□□ 1.04
Tnfaip3Q60769 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Tnfaip3Q60769 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Tnfaip3Q60769 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.51■■□□□ 1.03
Tnfaip3Q60769 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Tnfaip3Q60769 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Tnfaip3Q60769 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Tnfaip3Q60769 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Tnfaip3Q60769 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Tnfaip3Q60769 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Tnfaip3Q60769 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.5■■□□□ 1.03
Tnfaip3Q60769 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Tnfaip3Q60769 Gm11687-201ENSMUST00000118911 886 ntBASIC21.49■■□□□ 1.03
Tnfaip3Q60769 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.49■■□□□ 1.03
Tnfaip3Q60769 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Tnfaip3Q60769 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Tnfaip3Q60769 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Tnfaip3Q60769 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Tnfaip3Q60769 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.48■■□□□ 1.03
Tnfaip3Q60769 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Tnfaip3Q60769 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Tnfaip3Q60769 Gm4419-202ENSMUST00000226239 1431 ntBASIC21.47■■□□□ 1.03
Tnfaip3Q60769 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Tnfaip3Q60769 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Tnfaip3Q60769 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Tnfaip3Q60769 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Tnfaip3Q60769 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Tnfaip3Q60769 AC153911.1-201ENSMUST00000220378 758 ntBASIC21.46■■□□□ 1.03
Tnfaip3Q60769 Gm16437-201ENSMUST00000025669 507 ntBASIC21.46■■□□□ 1.03
Tnfaip3Q60769 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Tnfaip3Q60769 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Tnfaip3Q60769 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Tnfaip3Q60769 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Tnfaip3Q60769 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Tnfaip3Q60769 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Tnfaip3Q60769 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC21.44■■□□□ 1.02
Tnfaip3Q60769 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Tnfaip3Q60769 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Tnfaip3Q60769 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Tnfaip3Q60769 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Tnfaip3Q60769 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Tnfaip3Q60769 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Tnfaip3Q60769 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Tnfaip3Q60769 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Tnfaip3Q60769 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Tnfaip3Q60769 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Tnfaip3Q60769 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
Tnfaip3Q60769 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Tnfaip3Q60769 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Tnfaip3Q60769 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Tnfaip3Q60769 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Tnfaip3Q60769 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Tnfaip3Q60769 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Tnfaip3Q60769 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Tnfaip3Q60769 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
Tnfaip3Q60769 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC21.38■■□□□ 1.01
Tnfaip3Q60769 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Tnfaip3Q60769 Gm9910-201ENSMUST00000195385 1550 ntBASIC21.38■■□□□ 1.01
Tnfaip3Q60769 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Tnfaip3Q60769 Terc-201ENSMUST00000082862 423 ntBASIC21.37■■□□□ 1.01
Tnfaip3Q60769 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Tnfaip3Q60769 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Tnfaip3Q60769 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.36■■□□□ 1.01
Tnfaip3Q60769 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Tnfaip3Q60769 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.36■■□□□ 1.01
Tnfaip3Q60769 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC21.36■■□□□ 1.01
Tnfaip3Q60769 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Tnfaip3Q60769 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Tnfaip3Q60769 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 11.8 ms