Protein–RNA interactions for Protein: Q3V053

4933427I04Rik, Riken cDNA 4933427I04 gene, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
4933427I04RikQ3V053 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
4933427I04RikQ3V053 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
4933427I04RikQ3V053 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC25.76■■□□□ 1.71
4933427I04RikQ3V053 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
4933427I04RikQ3V053 AC153911.1-201ENSMUST00000220378 758 ntBASIC25.75■■□□□ 1.71
4933427I04RikQ3V053 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC25.75■■□□□ 1.71
4933427I04RikQ3V053 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
4933427I04RikQ3V053 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
4933427I04RikQ3V053 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
4933427I04RikQ3V053 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
4933427I04RikQ3V053 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
4933427I04RikQ3V053 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC25.71■■□□□ 1.71
4933427I04RikQ3V053 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC25.71■■□□□ 1.71
4933427I04RikQ3V053 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
4933427I04RikQ3V053 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.7
4933427I04RikQ3V053 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC25.7■■□□□ 1.7
4933427I04RikQ3V053 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
4933427I04RikQ3V053 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
4933427I04RikQ3V053 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC25.7■■□□□ 1.7
4933427I04RikQ3V053 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
4933427I04RikQ3V053 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC25.69■■□□□ 1.7
4933427I04RikQ3V053 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
4933427I04RikQ3V053 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
4933427I04RikQ3V053 Gm9910-201ENSMUST00000195385 1550 ntBASIC25.69■■□□□ 1.7
4933427I04RikQ3V053 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
4933427I04RikQ3V053 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
4933427I04RikQ3V053 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
4933427I04RikQ3V053 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
4933427I04RikQ3V053 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
4933427I04RikQ3V053 AC122428.3-201ENSMUST00000215551 2290 ntBASIC25.67■■□□□ 1.7
4933427I04RikQ3V053 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC25.67■■□□□ 1.7
4933427I04RikQ3V053 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC25.67■■□□□ 1.7
4933427I04RikQ3V053 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
4933427I04RikQ3V053 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC25.66■■□□□ 1.7
4933427I04RikQ3V053 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC25.66■■□□□ 1.7
4933427I04RikQ3V053 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
4933427I04RikQ3V053 Terc-201ENSMUST00000082862 423 ntBASIC25.65■■□□□ 1.7
4933427I04RikQ3V053 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
4933427I04RikQ3V053 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
4933427I04RikQ3V053 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
4933427I04RikQ3V053 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC25.65■■□□□ 1.7
4933427I04RikQ3V053 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
4933427I04RikQ3V053 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC25.64■■□□□ 1.7
4933427I04RikQ3V053 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
4933427I04RikQ3V053 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
4933427I04RikQ3V053 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
4933427I04RikQ3V053 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC25.63■■□□□ 1.69
4933427I04RikQ3V053 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC25.63■■□□□ 1.69
4933427I04RikQ3V053 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
4933427I04RikQ3V053 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
4933427I04RikQ3V053 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
4933427I04RikQ3V053 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
4933427I04RikQ3V053 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
4933427I04RikQ3V053 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC25.62■■□□□ 1.69
4933427I04RikQ3V053 Cap2-205ENSMUST00000225824 1634 ntBASIC25.62■■□□□ 1.69
4933427I04RikQ3V053 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC25.61■■□□□ 1.69
4933427I04RikQ3V053 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
4933427I04RikQ3V053 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC25.61■■□□□ 1.69
4933427I04RikQ3V053 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC25.61■■□□□ 1.69
4933427I04RikQ3V053 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
4933427I04RikQ3V053 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
4933427I04RikQ3V053 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC25.6■■□□□ 1.69
4933427I04RikQ3V053 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
4933427I04RikQ3V053 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
4933427I04RikQ3V053 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
4933427I04RikQ3V053 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC25.58■■□□□ 1.69
4933427I04RikQ3V053 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
4933427I04RikQ3V053 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC25.57■■□□□ 1.68
4933427I04RikQ3V053 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC25.57■■□□□ 1.68
4933427I04RikQ3V053 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC25.57■■□□□ 1.68
4933427I04RikQ3V053 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
4933427I04RikQ3V053 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
4933427I04RikQ3V053 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
4933427I04RikQ3V053 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
4933427I04RikQ3V053 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
4933427I04RikQ3V053 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
4933427I04RikQ3V053 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
4933427I04RikQ3V053 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
4933427I04RikQ3V053 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
4933427I04RikQ3V053 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC25.53■■□□□ 1.68
4933427I04RikQ3V053 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
4933427I04RikQ3V053 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
4933427I04RikQ3V053 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC25.53■■□□□ 1.68
4933427I04RikQ3V053 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
4933427I04RikQ3V053 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
4933427I04RikQ3V053 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
4933427I04RikQ3V053 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC25.52■■□□□ 1.68
4933427I04RikQ3V053 Gm12366-201ENSMUST00000121722 873 ntBASIC25.52■■□□□ 1.68
4933427I04RikQ3V053 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC25.52■■□□□ 1.68
4933427I04RikQ3V053 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC25.52■■□□□ 1.68
4933427I04RikQ3V053 Gm5786-201ENSMUST00000085368 882 ntBASIC25.52■■□□□ 1.68
4933427I04RikQ3V053 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
4933427I04RikQ3V053 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
4933427I04RikQ3V053 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
4933427I04RikQ3V053 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC25.51■■□□□ 1.67
4933427I04RikQ3V053 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
4933427I04RikQ3V053 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
4933427I04RikQ3V053 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
4933427I04RikQ3V053 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
4933427I04RikQ3V053 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC25.5■■□□□ 1.67
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms