Protein–RNA interactions for Protein: Q3U4B1

Ssbp4, Single stranded DNA binding protein 4, isoform CRA_b, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp4Q3U4B1 AC153911.1-201ENSMUST00000220378 758 ntBASIC19.39■□□□□ 0.69
Ssbp4Q3U4B1 Gm9910-201ENSMUST00000195385 1550 ntBASIC19.39■□□□□ 0.69
Ssbp4Q3U4B1 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ssbp4Q3U4B1 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ssbp4Q3U4B1 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ssbp4Q3U4B1 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC19.38■□□□□ 0.69
Ssbp4Q3U4B1 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Ssbp4Q3U4B1 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ssbp4Q3U4B1 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Ssbp4Q3U4B1 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ssbp4Q3U4B1 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ssbp4Q3U4B1 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ssbp4Q3U4B1 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ssbp4Q3U4B1 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC19.36■□□□□ 0.69
Ssbp4Q3U4B1 Gm12366-201ENSMUST00000121722 873 ntBASIC19.36■□□□□ 0.69
Ssbp4Q3U4B1 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC19.36■□□□□ 0.69
Ssbp4Q3U4B1 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC19.36■□□□□ 0.69
Ssbp4Q3U4B1 Gm5786-201ENSMUST00000085368 882 ntBASIC19.36■□□□□ 0.69
Ssbp4Q3U4B1 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ssbp4Q3U4B1 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ssbp4Q3U4B1 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ssbp4Q3U4B1 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ssbp4Q3U4B1 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ssbp4Q3U4B1 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
Ssbp4Q3U4B1 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ssbp4Q3U4B1 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ssbp4Q3U4B1 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ssbp4Q3U4B1 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC19.33■□□□□ 0.68
Ssbp4Q3U4B1 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC19.33■□□□□ 0.68
Ssbp4Q3U4B1 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ssbp4Q3U4B1 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Ssbp4Q3U4B1 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ssbp4Q3U4B1 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ssbp4Q3U4B1 Terc-201ENSMUST00000082862 423 ntBASIC19.33■□□□□ 0.68
Ssbp4Q3U4B1 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ssbp4Q3U4B1 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ssbp4Q3U4B1 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ssbp4Q3U4B1 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC19.32■□□□□ 0.68
Ssbp4Q3U4B1 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ssbp4Q3U4B1 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ssbp4Q3U4B1 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ssbp4Q3U4B1 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ssbp4Q3U4B1 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ssbp4Q3U4B1 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ssbp4Q3U4B1 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ssbp4Q3U4B1 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Ssbp4Q3U4B1 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC19.3■□□□□ 0.68
Ssbp4Q3U4B1 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ssbp4Q3U4B1 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ssbp4Q3U4B1 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Ssbp4Q3U4B1 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ssbp4Q3U4B1 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ssbp4Q3U4B1 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ssbp4Q3U4B1 Gm27502-201ENSMUST00000183495 199 ntBASIC19.29■□□□□ 0.68
Ssbp4Q3U4B1 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ssbp4Q3U4B1 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ssbp4Q3U4B1 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ssbp4Q3U4B1 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Ssbp4Q3U4B1 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ssbp4Q3U4B1 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ssbp4Q3U4B1 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ssbp4Q3U4B1 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ssbp4Q3U4B1 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Ssbp4Q3U4B1 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ssbp4Q3U4B1 Gm4419-202ENSMUST00000226239 1431 ntBASIC19.27■□□□□ 0.68
Ssbp4Q3U4B1 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ssbp4Q3U4B1 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ssbp4Q3U4B1 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.27■□□□□ 0.67
Ssbp4Q3U4B1 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ssbp4Q3U4B1 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ssbp4Q3U4B1 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC19.26■□□□□ 0.67
Ssbp4Q3U4B1 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC19.26■□□□□ 0.67
Ssbp4Q3U4B1 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ssbp4Q3U4B1 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC19.25■□□□□ 0.67
Ssbp4Q3U4B1 Gm7332-201ENSMUST00000118351 454 ntBASIC19.25■□□□□ 0.67
Ssbp4Q3U4B1 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ssbp4Q3U4B1 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ssbp4Q3U4B1 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ssbp4Q3U4B1 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ssbp4Q3U4B1 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC19.24■□□□□ 0.67
Ssbp4Q3U4B1 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ssbp4Q3U4B1 Gm14523-201ENSMUST00000117260 558 ntBASIC19.23■□□□□ 0.67
Ssbp4Q3U4B1 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ssbp4Q3U4B1 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ssbp4Q3U4B1 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ssbp4Q3U4B1 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC19.22■□□□□ 0.67
Ssbp4Q3U4B1 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ssbp4Q3U4B1 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ssbp4Q3U4B1 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC19.21■□□□□ 0.67
Ssbp4Q3U4B1 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
Ssbp4Q3U4B1 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ssbp4Q3U4B1 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ssbp4Q3U4B1 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ssbp4Q3U4B1 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Ssbp4Q3U4B1 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ssbp4Q3U4B1 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ssbp4Q3U4B1 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Ssbp4Q3U4B1 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ssbp4Q3U4B1 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC19.19■□□□□ 0.66
Ssbp4Q3U4B1 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 75.6 ms